Parental gene:

WBP11, ENSPPYG00000004323

Aliases:None
Description:WW domain binding protein 11 [Source:HGNC Symbol;Acc:16461]
Organism:Orangutan (Pongo abelii)
Coordinates:12:15261183..15279351(-)


>ENSPPYG00000004323
ATGGGACGGAGATCTACATCATCCACCAAGAGTGGAAAATTTATGAACCCCACAGACCAAGCCCGAAAGGAAGCCCGGAA
GAGAGAATTAAAGAAGAACAAAAAACAGCGCATGATGGTTCGAGCTGCAGTTTTAAAGATGAAGGATCCAAAACAGATAA
TCCGAGACATGGAGAAATTGGATGAAATGGAGTTTAACCCAGTGCAACAGCCACAATTAAATGAGAAAGTACTGAAAGAC
AAGCGTAAAAAGCTGCGTGAAACCTTTGAACGTATTCTACGACTCTATGAAAAAGAGAATCCAGATATTTACAAAGAATT
GAGAAAGCTAGAAGTAGAATATGAACAGAAGAGGGCTCAACTTAGCCAATATTTTGATGCTGTCAAGAATGCTCAGCATG
TGGAAGTGGAGAGTATTCCTTTGCCAGATATGCCACATGCTCCTTCCAACATTTTGATCCAGGACATTCCACTTCCTGGT
GCCCAGCCACCCTCTATCCTAAAGAAAACCTCAGCCTATGGACCTCCAACTCGGGCAGTTTCTATCCTTCCTCTTCTTGG
ACATGGTGTTCCACGTTTGCCCCCTGGCAGAAAACCTCCTGGCCCTCCCCCTGGTCCACCTCCTCCTCAAGTCGTGCAGA
TGTATGGCCGTAAAGTGGGTTTTGCCCTAGATCTTCCCCCTCGTAGGCGAGATGAAGACATGTTGTATAGTCCTGAACTT
GCCCAGCGAGGTCATGATGATGATGTTTCTAGCACCAGTGAAGATGATGGCTATCCTGAGGACATGGATCAAGATAAGCA
TGATGACAGTACTGATGACAGTGACACCGACAAATCAGATGGAGAAAGTGATGGGGATGAATTTGTGCACCGTGATGATG
GTGAGAGAGACAACAATGAAGAAAAGAAGTCAGGTCTGAGTGTACGGTTTGCAGATATGCCTGGAAAATCAAGGAAGAAA
AAGAAGAACATGAAGGAACTGACTCCTCTTCAAGCCATGATGCTTCGTATGGCAGGTCAAGAAATCCCTGAGGAGGGACG
GGAAGTAGAGGAATTTTCAGAGGACGATGATGATGATGATTCTGATGACTCTGAAGCAGAAAAGCAATCACAAAAGCAGC
ATAAAGAGGAATCCCATTCTGATGGCACATCCACTGCTTCTTCACAGCAGCAGGCTCCGCCGCAGTCTGTTCCTCCTTCT
CAGATACAAGCACCTCCCATGCCAGGACCACCACCTCTTGGACCACCACCTGCTCCACCATTACGGCCTCCTGGGCCACC
TACAGGCCTTCCTCCTGGTCCACCTCCAGGAGCTCCTCCATTCCTGAGACCACCTGGAATGCCAGGACTCCGAGGGCCCT
TACCCCGACTTTTACCTCCAGGACCACCACCAGGCCGACCCCCTGGCCCTCCCCCAGGTCCACCTCCAGGTCTGCCTCCT
GGTCCCCCTCCTCGTGGACCCCCACCAAGGCTACCTCCCCCTGCACCTCCAGGTATTCCTCCACCTCGTCCTGGCATGAT
GCGCCCACCTTTGGTGCCTCCCCTTGGACCTGCCCCCCCTGGGCTGTTCCCACCAGCTCCCTTGCCAAACCCTGGGGTTT
TAAGTGCCCCACCCAACTTGATTCAGCGACCCAAAGCAGATGATACAAGTGCAGCCACCATTGAGAAGAAAGCCACAGCA
ACCATCAGTGCCAAGCCACAGATCACTAATCCCAAGGCCGAGATTACTCGATTTGTGCCCACTGCACTGAGAGTACGTCG
GGAGAATAAAGGGGCTACTGCTGCTCCCCAAAGAAAGTCAGAGGATGATTCTGCTGTGCCTCTTGCCAAAGCAGCACCCA
AATCTGGTCCTTCTGTTCCTGTCTCAGTACAAACTAAGGATGATGTCTATGAGGCTTTCATGAAAGAGATGGAAGGGCTA
CTGTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 72 .76 RPM
SRP007412_cerebellum 38 .18 RPM
SRP007412_heart 29 .62 RPM
SRP007412_kidney 36 .63 RPM
SRP007412_liver 22 .40 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000014759 ortholog_one2many 1 retrogene
retro_btau_20,
Canis familiaris ENSCAFG00000012926 ortholog_one2one 2 retrogenes
retro_cfam_1369, retro_cfam_1911,
Callithrix jacchus ENSCJAG00000021611 ortholog_one2one 1 retrogene
retro_cjac_1737,
Homo sapiens ENSG00000084463 ortholog_one2one 2 retrogenes
retro_hsap_1878, retro_hsap_4719,
Gorilla gorilla ENSGGOG00000004448 ortholog_one2one 3 retrogenes
retro_ggor_1375, retro_ggor_1711, retro_ggor_2932,
Macropus eugenii ENSMEUG00000013971 ortholog_one2one 1 retrogene
retro_meug_1952,
Myotis lucifugus ENSMLUG00000015216 ortholog_one2many 1 retrogene
retro_mluc_1074,
Macaca mulatta ENSMMUG00000019299 ortholog_one2one 1 retrogene
retro_mmul_1329,
Monodelphis domestica ENSMODG00000017949 ortholog_one2many 1 retrogene
retro_mdom_143,
Mustela putorius furo ENSMPUG00000011619 ortholog_one2one 1 retrogene
retro_mputfur_280,
Mus musculus ENSMUSG00000030216 ortholog_one2one 1 retrogene
retro_mmus_2740,
Nomascus leucogenys ENSNLEG00000003926 ortholog_one2one 1 retrogene
retro_nleu_2651,
Oryctolagus cuniculus ENSOCUG00000017177 ortholog_one2one 1 retrogene
retro_ocun_974,
Otolemur garnettii ENSOGAG00000010518 ortholog_one2many 1 retrogene
retro_ogar_207,
Ochotona princeps ENSOPRG00000015008 ortholog_one2one 3 retrogenes
retro_opri_107, retro_opri_1159, retro_opri_678,
Pan troglodytes ENSPTRG00000004724 ortholog_one2one 3 retrogenes
retro_ptro_1260, retro_ptro_1637, retro_ptro_3136,
Rattus norvegicus ENSRNOG00000005505 ortholog_one2many 3 retrogenes
retro_rnor_1287, retro_rnor_2726, retro_rnor_741,
Rattus norvegicus ENSRNOG00000049593 ortholog_one2many 1 retrogene
retro_rnor_740,
Sorex araneus ENSSARG00000007085 ortholog_one2one 1 retrogene
retro_sara_753,
Sarcophilus harrisii ENSSHAG00000016649 ortholog_one2many 1 retrogene
retro_shar_81,
Tupaia belangeri ENSTBEG00000003394 ortholog_one2one 1 retrogene
retro_tbel_2213,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_1558 82.15 50.70
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2. retro_pabe_2099 80.91 53.82
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3. retro_pabe_3663 81.98 76.76
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Download FASTA sequences of all ENSPPYG00000004323 retrocopies