Parental gene:

RBM3, ENSPTRG00000021864

Aliases:None
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:X:48943041..48947010(+)


>ENSPTRG00000021864
ATGTCCTCTGAAGAAGGAAAGCTCTTCGTGGGAGGGCTCAACTTTAACACCGACGAGCAGGCACTGGAAGACCACTTCAG
CAGTTTCGGACCTATCTCTGAGGTGGTCGTTGTCAAGGACCGGGAGACTCAGCGGTCCAGGGGTTTTGGTTTCATCACCT
TCACCAACCCAGAGCATGCTTCAGTTGCCATGAGAGCCATGAATGGAGAGTCTCTGGATGGTCGTCAGATCCGTGTGGAT
CATGCAGGCAAGTCTGCTCGGGGAACCAGAGGAGGTGGCTTTGGGGCCCATGGGCGTGGTCGCAGCTACTCTAGAGGTGG
TGGGGACCAGGGCTATGGGAGTGGCAGGTATTATGACAGTCGACCTGGAGGGTATGGATATGGATATGGACGTTCCAGAG
ACTATAATGGCAGAAACCAGGGTGGTTATGACCGCTACTCAGGAGGAAATTACAGAGACAATTATGACAACTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 29 .92 RPM
SRP007412_cerebellum 99 .41 RPM
SRP007412_heart 138 .79 RPM
SRP007412_kidney 141 .77 RPM
SRP007412_liver 197 .68 RPM
SRP007412_testis 30 .98 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000013718 ortholog_one2one 1 retrogene
retro_acar_197,
Ailuropoda melanoleuca ENSAMEG00000012653 ortholog_one2one 1 retrogene
retro_amel_519,
Bos taurus ENSBTAG00000025848 ortholog_one2one 1 retrogene
retro_btau_1144,
Canis familiaris ENSCAFG00000015485 ortholog_one2one 2 retrogenes
retro_cfam_1475, retro_cfam_259,
Dipodomys ordii ENSDORG00000000182 ortholog_one2one 1 retrogene
retro_dord_547,
Equus caballus ENSECAG00000024257 ortholog_one2one 2 retrogenes
retro_ecab_130, retro_ecab_589,
Homo sapiens ENSG00000102317 ortholog_one2one 1 retrogene
retro_hsap_265,
Gadus morhua ENSGMOG00000012137 ortholog_many2many 1 retrogene
retro_gmor_4,
Loxodonta africana ENSLAFG00000007003 ortholog_one2many 1 retrogene
retro_lafr_1091,
Myotis lucifugus ENSMLUG00000003996 ortholog_one2one 1 retrogene
retro_mluc_1013,
Mus musculus ENSMUSG00000031167 ortholog_one2one 4 retrogenes
retro_mmus_2044, retro_mmus_2963, retro_mmus_3019, retro_mmus_501,
Nomascus leucogenys ENSNLEG00000007841 ortholog_one2one 2 retrogenes
retro_nleu_2591, retro_nleu_867,
Pongo abelii ENSPPYG00000020314 ortholog_one2one 1 retrogene
retro_pabe_40,
Pan troglodytes ENSPTRG00000018988 within_species_paralog 1 retrogene
retro_ptro_299,
Pteropus vampyrus ENSPVAG00000015630 ortholog_one2one 1 retrogene
retro_pvam_953,
Sus scrofa ENSSSCG00000021591 ortholog_one2many 1 retrogene
retro_sscr_842,
Ictidomys tridecemlineatus ENSSTOG00000027493 ortholog_one2many 1 retrogene
retro_itri_142,
Tarsius syrichta ENSTSYG00000008670 ortholog_one2one 4 retrogenes
retro_tsyr_1733, retro_tsyr_197, retro_tsyr_2002, retro_tsyr_679,
Tursiops truncatus ENSTTRG00000008587 ortholog_one2one 3 retrogenes
retro_ttru_1898, retro_ttru_928, retro_ttru_938,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_222 78.48 100.00
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Download FASTA sequences of all ENSPTRG00000021864 retrocopies