Parental gene:

RBM3, ENSG00000102317

Aliases:None
Description:RNA binding motif (RNP1, RRM) protein 3 [Source:HGNC Symbol;Acc:9900]
Organism:Human (Homo sapiens)
Coordinates:X:48432836..48437454(+)


>ENSG00000102317
ATGTCCTCTGAAGAAGGAAAGCTCTTCGTGGGAGGGCTCAACTTTAACACCGACGAGCAGGCACTGGAAGACCACTTCAG
CAGTTTCGGACCTATCTCTGAGGTGGTCGTTGTCAAGGACCGGGAGACTCAGCGGTCCAGGGGTTTTGGTTTCATCACCT
TCACCAACCCAGAGCATGCTTCAGTTGCCATGAGAGCCATGAACGGAGAGTCTCTGGATGGTCGTCAGATCCGTGTGGAT
CATGCAGGCAAGTCTGCTCGGGGAACCAGAGGAGGTGGCTTTGGGGCCCATGGGCGTGGTCGCAGCTACTCTAGAGGTGG
TGGGGACCAGGGCTATGGGAGTGGCAGGTATTATGACAGTCGACCTGGAGGGTATGGATATGGATATGGACGTTCCAGAG
ACTATAATGGCAGAAACCAGGGTGGTTATGACCGCTACTCAGGAGGAAATTACAGAGACAATTATGACAACTGA

Library Parental gene expression (RPM)
bodymap2_adipose 453 .50 RPM
bodymap2_adrenal 297 .03 RPM
bodymap2_brain 133 .91 RPM
bodymap2_breast 292 .57 RPM
bodymap2_colon 61 .82 RPM
bodymap2_heart 84 .15 RPM
bodymap2_kidney 146 .27 RPM
bodymap2_liver 55 .89 RPM
bodymap2_lung 135 .50 RPM
bodymap2_lymph_node 51 .92 RPM
bodymap2_ovary 146 .06 RPM
bodymap2_prostate 115 .32 RPM
bodymap2_skeletal_muscle 34 .81 RPM
bodymap2_testis 121 .47 RPM
bodymap2_thyroid 203 .98 RPM
bodymap2_white_blood_cells 226 .02 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000013718 ortholog_one2one 1 retrogene
retro_acar_197,
Ailuropoda melanoleuca ENSAMEG00000012653 ortholog_one2one 1 retrogene
retro_amel_519,
Bos taurus ENSBTAG00000025848 ortholog_one2one 1 retrogene
retro_btau_1144,
Canis familiaris ENSCAFG00000015485 ortholog_one2one 2 retrogenes
retro_cfam_1475, retro_cfam_259,
Dipodomys ordii ENSDORG00000000182 ortholog_one2one 1 retrogene
retro_dord_547,
Equus caballus ENSECAG00000024257 ortholog_one2one 2 retrogenes
retro_ecab_130, retro_ecab_589,
Homo sapiens ENSG00000147274 within_species_paralog 7 retrogenes
retro_hsap_23, retro_hsap_3074, retro_hsap_3587, retro_hsap_4144, retro_hsap_4846, retro_hsap_800, retro_hsap_91,
Homo sapiens ENSG00000164548 within_species_paralog 1 retrogene
retro_hsap_386,
Gadus morhua ENSGMOG00000012137 ortholog_many2many 1 retrogene
retro_gmor_4,
Loxodonta africana ENSLAFG00000007003 ortholog_one2many 1 retrogene
retro_lafr_1091,
Myotis lucifugus ENSMLUG00000003996 ortholog_one2one 1 retrogene
retro_mluc_1013,
Mus musculus ENSMUSG00000031167 ortholog_one2one 4 retrogenes
retro_mmus_2044, retro_mmus_2963, retro_mmus_3019, retro_mmus_501,
Nomascus leucogenys ENSNLEG00000007841 ortholog_one2one 2 retrogenes
retro_nleu_2591, retro_nleu_867,
Pongo abelii ENSPPYG00000020314 ortholog_one2one 1 retrogene
retro_pabe_40,
Pan troglodytes ENSPTRG00000021864 ortholog_one2one 1 retrogene
retro_ptro_222,
Pteropus vampyrus ENSPVAG00000015630 ortholog_one2one 1 retrogene
retro_pvam_953,
Sus scrofa ENSSSCG00000021591 ortholog_one2many 1 retrogene
retro_sscr_842,
Ictidomys tridecemlineatus ENSSTOG00000027493 ortholog_one2many 1 retrogene
retro_itri_142,
Tarsius syrichta ENSTSYG00000008670 ortholog_one2one 4 retrogenes
retro_tsyr_1733, retro_tsyr_197, retro_tsyr_2002, retro_tsyr_679,
Tursiops truncatus ENSTTRG00000008587 ortholog_one2one 3 retrogenes
retro_ttru_1898, retro_ttru_928, retro_ttru_938,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_265 77.85 100.00
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Download FASTA sequences of all ENSG00000102317 retrocopies