Parental gene:

CHMP1A, ENSPTRG00000008483

Aliases:None
Description:charged multivesicular body protein 1A [Source:HGNC Symbol;Acc:8740]
Organism:Chimpanzee (Pan troglodytes)
Coordinates:16:89377852..89392444(-)


>ENSPTRG00000008483
ATGGACGATACCCTGTTCCAGTTGAAGTTCACGGCGAAGCAGCTGGAGAAGCTGGCCAAGAAGGCGGAGAAGGACTCCAA
GGCGGAGCAGGCCAAAGTGAAGAAGGCCCTTCTGCAGAAAAATGTAGAGTGTGCCCGTGTGTATGCCGAGAACGCCATCC
GCAAGAAGAACGAAGGTGTGAACTGGCTTCGGATGGCGTCCCGCGTAGACGCAGTGGCCTCCAAGGTGCAGACAGCTGTG
ACTATGAAGGGGGTGACCAAGAATATGGCCCAGGTGACCAAAGCCCTGGACAAGGCCCTGAGCACCATGGACCTGCAGAA
GGTCTCCTCAGTGATGGACAGGTTCGAGCAGCAGGTGCAGAACCTGGACGTCCATACATCGGTGATGGAGGACTCCATGA
GCTCGGCCACCACCCTGACCACGCCGCAGGAGCAGGTGGATAGTCTCATCATGCAGATCGCCGAGGAGAATGGCCTGGAG
GTGCTGGACCAGCTCAGCCAGCTGCCCGAGGGCGCCTCTGCCGTGGGCGAGAGCTCTGTGCGCAGCCAGGAGGACCAGCT
GTCACGGAGGTTGGCCGCCTTGAGGAACTAG

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 63 .19 RPM
SRP007412_cerebellum 23 .66 RPM
SRP007412_heart 7 .61 RPM
SRP007412_kidney 69 .46 RPM
SRP007412_liver 52 .24 RPM
SRP007412_testis 28 .56 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000001216 ortholog_one2one 1 retrogene
retro_amel_1749,
Bos taurus ENSBTAG00000033331 ortholog_one2one 1 retrogene
retro_btau_1048,
Canis familiaris ENSCAFG00000019822 ortholog_one2one 1 retrogene
retro_cfam_1866,
Callithrix jacchus ENSCJAG00000010826 ortholog_one2one 1 retrogene
retro_cjac_1147,
Homo sapiens ENSG00000131165 ortholog_one2one 2 retrogenes
retro_hsap_359, retro_hsap_75,
Macaca mulatta ENSMMUG00000014909 ortholog_one2one 3 retrogenes
retro_mmul_1325, retro_mmul_476, retro_mmul_706,
Mustela putorius furo ENSMPUG00000007281 ortholog_one2one 1 retrogene
retro_mputfur_383,
Mus musculus ENSMUSG00000000743 ortholog_one2one 1 retrogene
retro_mmus_2260,
Oryctolagus cuniculus ENSOCUG00000023371 ortholog_one2one 1 retrogene
retro_ocun_1508,
Otolemur garnettii ENSOGAG00000004883 ortholog_one2many 1 retrogene
retro_ogar_170,
Pongo abelii ENSPPYG00000007667 ortholog_one2one 1 retrogene
retro_pabe_344,
Ictidomys tridecemlineatus ENSSTOG00000023813 ortholog_one2one 1 retrogene
retro_itri_1311,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_283 73.22 92.35
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_ptro_1278 55.61 100.00
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSPTRG00000008483 retrocopies