Parental gene:

MMU.17236, ENSMMUG00000014909

Aliases:None
Description:charged multivesicular body protein 1a [Source:RefSeq peptide;Acc:NP_001078827]
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:20:87773085..87784146(-)


>ENSMMUG00000014909
ATGGACGATACCCTGTTCCAGTTGAAGTTCACGGCGAAGCAGCTGGAGAAGCTGGCCAAGAAGGCGGAGAAGGACTCCAA
GGCAGAGCAGGCCAAAGTGAAGAAGGCCCTTCAGCAGAAAAATGTAGAGTGTGCCCGTGTGTATGCCGAGAACGCCATCC
GCAAGAAGAACGAAGGTGTGAACTGGCTTCGGATGGCGTCCCGCGTAGACGCAGTGGCCTCCAAGGTGCAGACGGCCGTG
ACCATGAAGGGGGTGACCAAGAACATGGCCCAGGTGACCAAAGCTCTGGACAAGGCCCTGAGCACCATGGACCTACAGAA
GGTCTCCTCAGTGATGGACAGGTTCGAGCAGCAGGTGCAGAACCTGGACGTCCACACGTCGGTGATGGAGGACTCCATGA
GCTCGGCCACCACGCTGACCACACCGCAGGAGCAGGTGGACAGCCTCATCATGCAGATCGCTGAGGAGAATGGCCTGGAG
GTGCTGGACCAGCTCAGCCAGCTGCCCGAGGGCGCCTCTGCCGTGGGCGAGAGCTCCGTGCGCAGCCAGGAGGACCAGCT
GTCACGGAGGTTGGCCGCCTTGAGGAACTAG

Library Parental gene expression (RPM)
SRP007412_brain 4 .93 RPM
SRP007412_brain_prefrontal_cortex 26 .50 RPM
SRP007412_cerebellum 4 .84 RPM
SRP007412_heart 5 .71 RPM
SRP007412_kidney 11 .27 RPM
SRP007412_liver 24 .03 RPM
SRP007412_testis 14 .40 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000001216 ortholog_one2one 1 retrogene
retro_amel_1749,
Bos taurus ENSBTAG00000033331 ortholog_one2one 1 retrogene
retro_btau_1048,
Canis familiaris ENSCAFG00000019822 ortholog_one2one 1 retrogene
retro_cfam_1866,
Callithrix jacchus ENSCJAG00000010826 ortholog_one2one 1 retrogene
retro_cjac_1147,
Homo sapiens ENSG00000131165 ortholog_one2one 2 retrogenes
retro_hsap_359, retro_hsap_75,
Mustela putorius furo ENSMPUG00000007281 ortholog_one2one 1 retrogene
retro_mputfur_383,
Mus musculus ENSMUSG00000000743 ortholog_one2one 1 retrogene
retro_mmus_2260,
Oryctolagus cuniculus ENSOCUG00000023371 ortholog_one2one 1 retrogene
retro_ocun_1508,
Otolemur garnettii ENSOGAG00000004883 ortholog_one2many 1 retrogene
retro_ogar_170,
Pongo abelii ENSPPYG00000007667 ortholog_one2one 1 retrogene
retro_pabe_344,
Pan troglodytes ENSPTRG00000008483 ortholog_one2one 2 retrogenes
retro_ptro_1278, retro_ptro_283,
Ictidomys tridecemlineatus ENSSTOG00000023813 ortholog_one2one 1 retrogene
retro_itri_1311,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_476 71.07 99.49
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_mmul_706 71.07 99.49
Please wait, loading
Please wait, loading
Please wait, loading
3. retro_mmul_1325 56.12 100.00
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSMMUG00000014909 retrocopies