Parental gene:

YWHAZ, ENSOPRG00000000276

Aliases:None
Description:tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide [Source:HGNC Symbol;Acc:12855]
Organism:Southern American pika (Ochotona princeps)
Coordinates:GeneScaffold_3630:66558..87116(-)


>ENSOPRG00000000276
GACATGGCAGCCTGCATGAAGTCTGTAACTGAGCAAGGAGCCGAGTTATCTAATGAGGAGAGGAACCTCCTCTCTGTTGC
CTATAAAAATGTCGTAGGAGCCCGTAGATCATCATGGAGGGTCGTCTCAAGTATTGAGCAGAAGACCGAAGGTGCTGAGA
AGAAGCAGCAGATGGCTCGTGAATACAGGGAGAAAATTGAGACCGAGCTCAGAGATATCTGCAACGATGTACTGTCTCTT
TTGGAAAAGTTCTTGATCCCCAATGCTTCACAAGCAGAGAGCAAGGTCTTCTATTTGAAAATGAAAGGAGACTACTACCG
TTACCTGGCCGAGGTCGCTGCTGGTGATGACAAGAAGGGGATTGTGGATCAGTCCCAACAGGCATACCAAGAAGCTTTTG
AAATCAGCAAAAAGGAGATGCAGCCCACGCATCCCATCAGATTGGGTCTGGCCCTTAACTTCTCTGTGTTCTATTACGAG
ATTCTGAATTCCCCAGAAAAAGCCTGCTCTCTGGCGAAGACGGCTTTTGATGAAGCCATTGCTGAACTTGATACGTTAAG
TGAAGAGTCATACAAAGACAGCACGCTAATAATGCAATTACTGAGAGACTTGACANNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNGAAGCAGGAGAAGGAGGGGAAAATTAA

Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000008694 ortholog_one2one 2 retrogenes
retro_acar_25, retro_acar_44,
Bos taurus ENSBTAG00000000236 possible_ortholog 4 retrogenes
retro_btau_1482, retro_btau_635, retro_btau_68, retro_btau_910,
Canis familiaris ENSCAFG00000000580 possible_ortholog 6 retrogenes
retro_cfam_1302, retro_cfam_1521, retro_cfam_158, retro_cfam_1840, retro_cfam_233, retro_cfam_465,
Callithrix jacchus ENSCJAG00000015844 possible_ortholog 5 retrogenes
retro_cjac_1769, retro_cjac_2164, retro_cjac_3000, retro_cjac_31, retro_cjac_881,
Dasypus novemcinctus ENSDNOG00000001672 possible_ortholog 10 retrogenes
retro_dnov_1007, retro_dnov_117, retro_dnov_1354, retro_dnov_1579, retro_dnov_1769, retro_dnov_1907, retro_dnov_1993, retro_dnov_2588, retro_dnov_892, retro_dnov_99,
Ficedula albicollis ENSFALG00000005860 ortholog_one2one 1 retrogene
retro_falb_13,
Gallus gallus ENSGALG00000010725 ortholog_one2one 1 retrogene
retro_ggal_3,
Gorilla gorilla ENSGGOG00000022133 possible_ortholog 9 retrogenes
retro_ggor_1092, retro_ggor_1754, retro_ggor_211, retro_ggor_2379, retro_ggor_2997, retro_ggor_2998, retro_ggor_3020, retro_ggor_499, retro_ggor_544,
Monodelphis domestica ENSMODG00000006158 ortholog_one2one 8 retrogenes
retro_mdom_1589, retro_mdom_1664, retro_mdom_1763, retro_mdom_1815, retro_mdom_1875, retro_mdom_1958, retro_mdom_255, retro_mdom_446,
Mus musculus ENSMUSG00000022285 ortholog_one2one 3 retrogenes
retro_mmus_163, retro_mmus_2187, retro_mmus_744,
Oryctolagus cuniculus ENSOCUG00000000734 possible_ortholog 2 retrogenes
retro_ocun_1091, retro_ocun_248,
Ochotona princeps ENSOPRG00000011836 within_species_paralog 2 retrogenes
retro_opri_56, retro_opri_924,
Pongo abelii ENSPPYG00000018791 ortholog_one2one 7 retrogenes
retro_pabe_103, retro_pabe_1242, retro_pabe_2047, retro_pabe_3417, retro_pabe_3740, retro_pabe_556, retro_pabe_89,
Pelodiscus sinensis ENSPSIG00000003703 ortholog_one2one 1 retrogene
retro_psin_13,
Sarcophilus harrisii ENSSHAG00000012671 possible_ortholog 2 retrogenes
retro_shar_126, retro_shar_409,
Sus scrofa ENSSSCG00000006062 possible_ortholog 2 retrogenes
retro_sscr_222, retro_sscr_35,
Taeniopygia guttata ENSTGUG00000012078 ortholog_one2one 1 retrogene
retro_tgut_4,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_opri_218 68.26 100.00
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2. retro_opri_967 68.26 100.00
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3. retro_opri_1218 73.11 92.86
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Download FASTA sequences of all ENSOPRG00000000276 retrocopies