Parental gene:

PSME3, ENSOCUG00000015986

Aliases:None
Description:proteasome (prosome, macropain) activator subunit 3 (PA28 gamma; Ki) [Source:HGNC Symbol;Acc:9570]
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:19:43540132..43544592(+)


>ENSOCUG00000015986
ATGGCCTCGTTGCTGAAGGTGGATCAGGAAGTGAAGCTCAAGGTTGATTCTTTCAGGGAGCGGATCACAAGTGAGGCAGA
AGACTTGGTGGCAAATTTTTTCCCAAAGAAGTTGTTAGAACTTGATAGTTTTTTGAAGGAACCAATCCTAAACATCCATG
ACCTAACTCAGATCCACTCGGACATGAATCTCCCGGTCCCTGACCCCATTCTGCTCACCAATAGCCACGATGGACTGGAT
GGTCCCACTTACAAGAAGCGAAGATTGGATGAGTGTGACGAGGCCTTCCAAGGAACCAAGGTGTTTGTGATGCCCAATGG
GATGCTAAAAAGCAACCAGCAGCTGGTCGACATTATTGAGAAAGTGAAACCTGAGATCCGGCTGCTGATCGAGAAATGTA
ACACGGTGAGGCAGGGGCTAGTGTTTTGGGCTCTCACCCTCCAGGTGAAAATGTGGGTACAGCTCCTGATTCCCCGGATA
GAAGATGGGAACAACTTTGGAGTGTCCATTCAGGAGGAGACAGTTGCAGAACTAAGAACCGTTGAGAGTGAAGCTGCATC
TTATCTGGACCAGATTTCTAGATATTATATTACAAGAGCCAAATTGGTTTCTAAAATAGCTAAATATCCCCATGTGGAGG
ACTACCGCCGCACCGTGACGGAGATTGATGAGAAAGAATACATCAGCCTTCGGCTTATCATATCAGAGCTGAGGAACCAA
TATGTCACTCTGCATGACATGATCCTCAAAAATATTGAGAAGATCAAACGGCCCCGGAGCAGCAATGCAGAGACGCTGTA
C

Library Parental gene expression (RPM)
SRP017611_brain 46 .47 RPM
SRP017611_kidney 33 .45 RPM
SRP017611_liver 15 .41 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000013688 ortholog_one2many 2 retrogenes
retro_acar_118, retro_acar_37,
Bos taurus ENSBTAG00000019918 ortholog_one2one 2 retrogenes
retro_btau_1249, retro_btau_941,
Callithrix jacchus ENSCJAG00000013111 ortholog_one2one 1 retrogene
retro_cjac_2307,
Cavia porcellus ENSCPOG00000012552 ortholog_one2one 1 retrogene
retro_cpor_1204,
Equus caballus ENSECAG00000012620 ortholog_one2many 2 retrogenes
retro_ecab_29, retro_ecab_827,
Homo sapiens ENSG00000131467 ortholog_one2one 1 retrogene
retro_hsap_245,
Loxodonta africana ENSLAFG00000013446 ortholog_one2one 1 retrogene
retro_lafr_725,
Mustela putorius furo ENSMPUG00000010027 ortholog_one2one 1 retrogene
retro_mputfur_619,
Pongo abelii ENSPPYG00000008372 ortholog_one2one 1 retrogene
retro_pabe_413,
Pan troglodytes ENSPTRG00000009225 ortholog_one2one 1 retrogene
retro_ptro_212,
Sus scrofa ENSSSCG00000017385 ortholog_one2one 1 retrogene
retro_sscr_784,
Ictidomys tridecemlineatus ENSSTOG00000028833 ortholog_one2one 1 retrogene
retro_itri_153,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_641 72.79 55.47
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Download FASTA sequences of all ENSOCUG00000015986 retrocopies