Parental gene:

ENSACAG00000013688

Aliases:None
Description:None
Organism:Anole lizard (Anolis carolinensis)
Coordinates:6:62293797..62314400(+)


>ENSACAG00000013688
ATGGCCTCCCTCCTCAAGGTGGACCCGGAAGTGAAGATCAAGGTAGACTCTTTCAGGGAGCGAATCACAGGGGAAGCTGA
AGATCTAGTAGCTAATTTTTTCCCAAAGAAGCTTTTAGAACTTGATGCTTTCCTTAAGGATCCTATACTGAACATTCATG
ATCTCACCCAAATCCACTCAGATATGAACCTTCCTGTCCCTGACCCAATCCTGCTCACAAACAGTCATGATGGACTGGAT
GGGCCCAACCTGAAAAAGAGAAAACTGGAAGAATGTGAAGAGACCTTCCAGGGTACCAAAGTCTTTGTCATGCCTAATGG
GATGCTGAAGAGCAACCAACAGCTGGTGGACATCATTGAGAAGGTGAAACCCGAGATCCGACTGCTGATTGAGAAATGCA
ACACGGTCAAAATGTGGGTGCAGCTATTGATTCCCAGGATAGAAGATGGCAACAATTTTGGTGTTTCTATTCAGGAAGAA
ACTGTGGCTGAGCTCCGGACCGTGGAGAGTGAGGCAGCTTCATACTTGGACCAGATCTCTAGATATTATATCACACGGGC
AAAGCTGGTTTCTAAAATAGCAAAATATCCTCATGTGGAGGATTACCGTCGCACAGTGACAGAGATGGATGAAAAGGAAT
ATATCAGTCTGCGGCTCATCATTTCAGAGCTGAGAAATCAATACGTGACCCTGCACGACATGATCCTAAAGAACATTGAG
AAGATCAAGCGACCCCGGAGCAGCAATGCAGAGACTCTCTACTGA

Library Parental gene expression (RPM)
SRP009831_adrenal 19 .89 RPM
SRP009831_brain 18 .32 RPM
SRP009831_dewlap 39 .95 RPM
SRP009831_embryo 69 .86 RPM
SRP009831_heart 24 .80 RPM
SRP009831_liver 19 .76 RPM
SRP009831_lung 16 .93 RPM
SRP009831_ovary 46 .06 RPM
SRP009831_skeletal_muscle 34 .75 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000019918 ortholog_one2many 2 retrogenes
retro_btau_1249, retro_btau_941,
Callithrix jacchus ENSCJAG00000013111 ortholog_one2many 1 retrogene
retro_cjac_2307,
Cavia porcellus ENSCPOG00000012552 ortholog_one2many 1 retrogene
retro_cpor_1204,
Equus caballus ENSECAG00000012620 ortholog_many2many 2 retrogenes
retro_ecab_29, retro_ecab_827,
Homo sapiens ENSG00000131467 ortholog_one2many 1 retrogene
retro_hsap_245,
Loxodonta africana ENSLAFG00000013446 ortholog_one2many 1 retrogene
retro_lafr_725,
Mustela putorius furo ENSMPUG00000010027 ortholog_one2many 1 retrogene
retro_mputfur_619,
Oryctolagus cuniculus ENSOCUG00000015986 ortholog_one2many 1 retrogene
retro_ocun_641,
Pongo abelii ENSPPYG00000008372 ortholog_one2many 1 retrogene
retro_pabe_413,
Pan troglodytes ENSPTRG00000009225 ortholog_one2many 1 retrogene
retro_ptro_212,
Sus scrofa ENSSSCG00000017385 ortholog_one2many 1 retrogene
retro_sscr_784,
Ictidomys tridecemlineatus ENSSTOG00000028833 ortholog_one2many 1 retrogene
retro_itri_153,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_acar_37 74.80 100.00
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2. retro_acar_118 84.35 57.48
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Download FASTA sequences of all ENSACAG00000013688 retrocopies