Parental gene:

ENSOCUG00000006933

Aliases:None
Description:None
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:3:62552667..62566593(+)


>ENSOCUG00000006933
ACATTGACGTTCTTTTGTATAGGAGTTAAAGTTCCTCGTAATTTTCGCTTGTTGGAAGAACTTGAAGAAGGACAAAAAGG
AGTAGGCGATGGTACGGTTAGCTGGGGCCTTGAAGATGATGAAGATATGACACTTACAAGGTGGACAGGCATGATTATTG
GGCCACCAAGGACAAATTATGAGAACAGAATATATAGCCTGAAAGTAGAATGTGGACCTAAATACCCAGAAGCTCCTCCA
TCAGTTAGATTTGTAACAAAAATTAATATGAATGGGATAAATAATTCCAGTGGAATGGTGGATGCACGGAGCATACCAGT
ATTAGCAAAATGGCAAAATTCATATAGCATTAAAGTTGTACTTCAAGAGCTAAGACGTCTAATGATGTCCAAAGAAAATA
TGAAGCTTCCACAGCCACCAGAAGGACAAACATACAACAATTAA

Library Parental gene expression (RPM)
SRP017611_brain 0 .66 RPM
SRP017611_kidney 0 .91 RPM
SRP017611_liver 0 .31 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000023218 possible_ortholog 1 retrogene
retro_btau_902,
Canis familiaris ENSCAFG00000028827 ortholog_one2one 1 retrogene
retro_cfam_1223,
Callithrix jacchus ENSCJAG00000032182 possible_ortholog 1 retrogene
retro_cjac_814,
Cavia porcellus ENSCPOG00000014413 ortholog_one2one 4 retrogenes
retro_cpor_1277, retro_cpor_540, retro_cpor_751, retro_cpor_849,
Felis catus ENSFCAG00000007602 ortholog_one2one 6 retrogenes
retro_fcat_1169, retro_fcat_1256, retro_fcat_141, retro_fcat_15, retro_fcat_1678, retro_fcat_1868,
Loxodonta africana ENSLAFG00000017749 possible_ortholog 1 retrogene
retro_lafr_1168,
Macropus eugenii ENSMEUG00000016581 ortholog_one2many 1 retrogene
retro_meug_2093,
Myotis lucifugus ENSMLUG00000002057 ortholog_one2one 6 retrogenes
retro_mluc_1077, retro_mluc_2371, retro_mluc_386, retro_mluc_559, retro_mluc_659, retro_mluc_985,
Macaca mulatta ENSMMUG00000008223 ortholog_one2one 1 retrogene
retro_mmul_1066,
Monodelphis domestica ENSMODG00000010191 ortholog_many2many 10 retrogenes
retro_mdom_1065, retro_mdom_1151, retro_mdom_1167, retro_mdom_1435, retro_mdom_1660, retro_mdom_173, retro_mdom_1979, retro_mdom_736, retro_mdom_786, retro_mdom_979,
Mustela putorius furo ENSMPUG00000001010 ortholog_one2one 2 retrogenes
retro_mputfur_460, retro_mputfur_979,
Mus musculus ENSMUSG00000022674 possible_ortholog 4 retrogenes
retro_mmus_1385, retro_mmus_189, retro_mmus_2048, retro_mmus_2770,
Nomascus leucogenys ENSNLEG00000013382 possible_ortholog 1 retrogene
retro_nleu_1671,
Oryctolagus cuniculus ENSOCUG00000026172 within_species_paralog 4 retrogenes
retro_ocun_1450, retro_ocun_1481, retro_ocun_454, retro_ocun_539,
Procavia capensis ENSPCAG00000000293 possible_ortholog 1 retrogene
retro_pcap_138,
Pongo abelii ENSPPYG00000018575 possible_ortholog 1 retrogene
retro_pabe_2739,
Rattus norvegicus ENSRNOG00000001829 possible_ortholog 1 retrogene
retro_rnor_1181,
Sus scrofa ENSSSCG00000022190 possible_ortholog 1 retrogene
retro_sscr_524,
Ictidomys tridecemlineatus ENSSTOG00000021769 possible_ortholog 2 retrogenes
retro_itri_568, retro_itri_900,
Tupaia belangeri ENSTBEG00000015720 ortholog_one2one 27 retrogenes
retro_tbel_1333, retro_tbel_1456, retro_tbel_1479, retro_tbel_1551, retro_tbel_160, retro_tbel_1740, retro_tbel_1784, retro_tbel_2129, retro_tbel_2149, retro_tbel_2317, retro_tbel_2334, retro_tbel_2496, retro_tbel_2890, retro_tbel_2935, retro_tbel_3021, retro_tbel_3102, retro_tbel_3141, retro_tbel_3461, retro_tbel_3573, retro_tbel_3734, retro_tbel_3935, retro_tbel_3971, retro_tbel_4227, retro_tbel_4319, retro_tbel_4720, retro_tbel_640, retro_tbel_909,
Tursiops truncatus ENSTTRG00000008325 possible_ortholog 1 retrogene
retro_ttru_1623,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_5 100.00 95.24
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Download FASTA sequences of all ENSOCUG00000006933 retrocopies