Parental gene: | Ube2v2, ENSMUSG00000022674 |
| Aliases: | None |
| Description: | ubiquitin-conjugating enzyme E2 variant 2 [Source:MGI Symbol;Acc:MGI:1917870] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | 16:15552676..15594524(-) |
>ENSMUSG00000022674
ATGGCGGTCTCCACAGGAGTTAAAGTTCCTCGTAATTTTCGCTTGTTGGAAGAACTTGAAGAAGGACAAAAAGGAGTAGG
TGATGGTACTGTTAGCTGGGGCCTTGAAGATGATGAAGACATGACACTTACAAGGTGGACAGGCATGATTATTGGGCCAC
CAAGGACAAACTATGAAAACAGAATATATAGCCTGAAAGTAGAATGTGGATCTAAATACCCAGAAGCTCCTCCATCAGTT
AGATTTGTAACAAAAATTAATATGAATGGGATCAATAATTCCAGTGGAATGGTGGATGCACGGAGCATACCAGTATTAGC
AAAATGGCAAAATTCCTATAGCATTAAAGTCATACTTCAAGAGCTAAGACGTCTTATGATGTCCAAAGAAAATATGAAGC
TTCCACAGCCTCCAGAAGGACAGACGTACAACAACTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 23 .48 RPM |
| SRP007412_cerebellum | 18 .80 RPM |
| SRP007412_heart | 3 .89 RPM |
| SRP007412_kidney | 6 .70 RPM |
| SRP007412_liver | 5 .24 RPM |
| SRP007412_testis | 3 .98 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000032182 | possible_ortholog | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000017749 | possible_ortholog | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000016581 | ortholog_one2many | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000010191 | ortholog_many2many | 10 retrogenes | |
| Mus musculus | ENSMUSG00000090213 | within_species_paralog | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000013382 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000006933 | possible_ortholog | 1 retrogene | |
| Procavia capensis | ENSPCAG00000000293 | possible_ortholog | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000001829 | ortholog_one2one | 1 retrogene | |
| Sus scrofa | ENSSSCG00000022190 | possible_ortholog | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000008325 | possible_ortholog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_189 | 86.21 | 100.00 | Please wait, loading  |
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| 2. | retro_mmus_1385 | 100.00 | 100.00 | Please wait, loading |
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| 3. | retro_mmus_2048 | 82.99 | 100.00 | Please wait, loading |
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| 4. | retro_mmus_2770 | 100.00 | 100.00 | Please wait, loading |
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Download FASTA sequences of all ENSMUSG00000022674 retrocopies