Parental gene: | Cdv3, ENSMUSG00000032803 |
| Aliases: | Cdv3, 2510010F10Rik, C230084J24Rik, C79446, TPP36 |
| Description: | carnitine deficiency-associated gene expressed in ventricle 3 [Source:MGI Symbol;Acc:MGI:2448759] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | 9:103353101..103365780(-) |
>ENSMUSG00000032803
ATGGCCGAGACCGAGGAGCGGAGCCTGGACAACTTCTTCGCCAAGAGGGACAAGAAGAAGAAGAAGGAACGGAGCAGTCG
CGCGGCCAACGCGGCGAGCGGCGCGGGCGGGAGCAGCGCGGCGGCGGGCTCCAGGCCGGGCGATGGCGGGAGCCTGGGCT
CCGGTGCCAGGTCGGGCGACGGCGGGAGCTTGGGCTCCGGCTCCAGGTCGGGCGACGGCGGGAGCTCGGGCTCTGGTGCT
AGGTCCGGAGACGGCGGGAGCTCGAGGTCCGGAGACGGCGGGAGCGCGGGCCCCGCCGGCAAGGCCATAACGAAGGATGA
AAATGAGTGGAAAGAATTTGAGCAAAGAGAGGTTGATTACAGCGGATTAAGAGTTCAGGCAATGCAAATAAGTGAAAAGG
AAGATGATGATAATGAGAAGAGAGAAGATCCAGGAGATAATTGGGAAGAAGGTGGAGGTGGCAGTGGAGCAGAAAAATCT
TCAGGTCCCTGGAATAAAACCGCTCCGGTACAAGCGCCTCCTGCTCCAGTAACAGTTACAGAAACCCCGGAGCCAGCAAT
GCCCAGTGGTGTATACAGGCCTCCTGGGGCAAGGCTAACCACAACAAGGAAAACGCCACAAGGACCACCAGAAATATACA
GTGACACGCAGTTCCCATCCCTGCAGTCCACTGCCAAGCATGTAGAGAGCCGGAAGGATAAAGAAATGGAGAAGAGCTTT
GAAGTAGTAAGACACAAAAATAGAGATAGGGAGGAGGTTTCAAAAAACCAGGCCCTTAAACTTCAGCTAGACAACCAGTA
TGCTGTGCTTGAGAATCAGAAGTACAGCCACACACAGTACAGCTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 40 .39 RPM |
| SRP007412_cerebellum | 30 .48 RPM |
| SRP007412_heart | 46 .13 RPM |
| SRP007412_kidney | 41 .35 RPM |
| SRP007412_liver | 51 .23 RPM |
| SRP007412_testis | 116 .68 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000035556 | ortholog_one2many | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000008963 | ortholog_one2one | 5 retrogenes | |
| Callithrix jacchus | ENSCJAG00000002998 | ortholog_one2one | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000010208 | ortholog_one2one | 5 retrogenes | |
| Equus caballus | ENSECAG00000015689 | ortholog_one2one | 2 retrogenes | |
| Homo sapiens | ENSG00000091527 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000027821 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000009864 | ortholog_one2one | 1 retrogene | |
| Ochotona princeps | ENSOPRG00000003600 | ortholog_one2one | 3 retrogenes | |
| Pongo abelii | ENSPPYG00000025898 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000015409 | ortholog_one2one | 1 retrogene | |
| Sus scrofa | ENSSSCG00000011637 | ortholog_one2many | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000014910 | possible_ortholog | 5 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_1266 | 98.65 | 62.71 | Please wait, loading  |
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| 2. | retro_mmus_2405 | 84.19 | 74.38 | Please wait, loading |
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| 3. | retro_mmus_2408 | 77.02 | 80.78 | Please wait, loading |
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| 4. | retro_mmus_2411 | 91.26 | 65.12 | Please wait, loading |
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| 5. | retro_mmus_2412 | 82.41 | 75.09 | Please wait, loading |
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| 6. | retro_mmus_2416 | 93.44 | 65.12 | Please wait, loading |
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| 7. | retro_mmus_2418 | 90.86 | 65.84 | Please wait, loading |
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| 8. | retro_mmus_2422 | 79.13 | 88.26 | Please wait, loading |
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| 9. | retro_mmus_2423 | 79.19 | 76.51 | Please wait, loading |
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| 10. | retro_mmus_2534 | 81.08 | 76.87 | Please wait, loading |
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Download FASTA sequences of all ENSMUSG00000032803 retrocopies