Parental gene:

BT.56566, ENSBTAG00000035556

Aliases:None
Description:protein CDV3 homolog [Source:RefSeq peptide;Acc:NP_001178969]
Organism:Cow (Bos taurus)
Coordinates:1:136947202..136961387(-)


>ENSBTAG00000035556
ATGGCTGAGACGGAGGAGCGGAGCCTAGACAACTTCTTCGCCAAGAGAGATAAAAAGAAGAAGAAGGAGCGGAGCAACCG
GGCGGCGAGCGCAGCGAGCGCGGCGGGAGGCGCTGGCGGGAGCAGCGGAGCCACGGGCGCGGCGGGCGGTGGGGCGGGCG
CGAGGACCCGGCCGGGCGATAGCGGGACCGCGGGCGTGGGGGCCACTGGCCCTGGGGCCGCCACCAAGGTTGTGACAAAG
GAGGAAGATGAGTGGAAAGAATTTGAGCAAAAAGAGGTTGATTACAGCGGCCTAAGAGTTCAAGCAATGCAAATAAGTAG
TGAAAAGGAAGAAGATGAAGTTGAAAAGAGAGAAGATCCAAGTGATAATTGGGAAGAAGGTGGAGGTGGTGGTGGTGGTG
TAGAAAAGTCTTCAGGCCCTTGGAATAAAACTGCTCCGGTACAAGCACCTCCTGCTCCAGTAGTTGTTACAGAAACCCCA
GAACCGACAATGACTAGTGGCGTGTATAGGCCTCCTGGAGCTAGGTTGACCACAACAAGGAAAGCACCACAAGGACCACC
AGAAATCTATAGTGATACGCAGTTCCCATCCCTGCAGTCCACTGCCAAGCATGTAGAGAGCCGGAAGGATAAAGAAATGG
AGAAGAGCTTTGAAGTAGTAAGACACAAAACTAGAGGTAGGGATGAGTTTTCAAAAAACCAGGCCCTTAAACTTCAGCTA
GACAACCAGTATGCTGTGCTTGAGAATCAGAAAAGCAGCCACACACAGTACAATTAA

Library Parental gene expression (RPM)
ERP005899_liver 133 .88 RPM
ERP005899_muscle 87 .74 RPM
SRP017611_brain 81 .17 RPM
SRP017611_kidney 170 .29 RPM
SRP017611_liver 104 .20 RPM
SRP030211_testis 218 .37 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000008963 ortholog_one2many 5 retrogenes
retro_chof_1355, retro_chof_1701, retro_chof_1763, retro_chof_2308, retro_chof_818,
Callithrix jacchus ENSCJAG00000002998 ortholog_one2many 1 retrogene
retro_cjac_2928,
Dasypus novemcinctus ENSDNOG00000010208 ortholog_one2many 5 retrogenes
retro_dnov_2359, retro_dnov_2616, retro_dnov_460, retro_dnov_496, retro_dnov_656,
Equus caballus ENSECAG00000015689 ortholog_one2many 2 retrogenes
retro_ecab_444, retro_ecab_636,
Homo sapiens ENSG00000091527 ortholog_one2many 1 retrogene
retro_hsap_2678,
Gorilla gorilla ENSGGOG00000027821 ortholog_one2many 1 retrogene
retro_ggor_1869,
Myotis lucifugus ENSMLUG00000009864 possible_ortholog 1 retrogene
retro_mluc_1296,
Mus musculus ENSMUSG00000032803 ortholog_one2many 10 retrogenes
retro_mmus_1266, retro_mmus_2405, retro_mmus_2408, retro_mmus_2411, retro_mmus_2412, retro_mmus_2416, retro_mmus_2418, retro_mmus_2422, retro_mmus_2423, retro_mmus_2534,
Nomascus leucogenys ENSNLEG00000003470 ortholog_one2many 1 retrogene
retro_nleu_1181,
Oryctolagus cuniculus ENSOCUG00000012748 ortholog_one2many 1 retrogene
retro_ocun_1106,
Ochotona princeps ENSOPRG00000003600 ortholog_one2many 3 retrogenes
retro_opri_1017, retro_opri_739, retro_opri_740,
Pongo abelii ENSPPYG00000025898 ortholog_one2many 1 retrogene
retro_pabe_2301,
Pan troglodytes ENSPTRG00000015409 ortholog_one2many 1 retrogene
retro_ptro_1805,
Sus scrofa ENSSSCG00000011637 ortholog_one2many 1 retrogene
retro_sscr_701,
Tupaia belangeri ENSTBEG00000014910 possible_ortholog 5 retrogenes
retro_tbel_2284, retro_tbel_2443, retro_tbel_4022, retro_tbel_4157, retro_tbel_4378,
Tarsius syrichta ENSTSYG00000011401 possible_ortholog 2 retrogenes
retro_tsyr_1381, retro_tsyr_1759,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_253 89.05 81.01
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSBTAG00000035556 retrocopies