Parental gene:

RPS16, ENSMLUG00000029089

Aliases:None
Description:None
Organism:Microbat (Myotis lucifugus)
Coordinates:GL429952:2123646..2126191(-)


>ENSMLUG00000029089
ATGCCGTCCAAGGGTCCTCTGCAGTCTGTGCAGGTCTTCGGACGCAAGAAGACGGCCACAGCCGTGGCGCACTGCAAACG
GGGCAACGGCCTCATAAAGGTGAACGGACGGCCCCTGGAGATGATCGAGCCGCGGACGCTTCAGTACAAGCTGCTGGAAC
CTGTTCTGCTTCTTGGGAAGGAGCGATTTGCTGGCGTGGACATCCGAGTCCGTGTGAAGGGTGGTGGTCATGTGGCCCAG
ATTTATGCAATCCGCCAGTCCATTTCCAAAGCCCTGGTGGCCTATTACCAGAAATATGTGGATGAAGCTTCCAAGAAGGA
GATCAAAGACATCCTTATCCAGTATGACCGGACCCTGCTGGTAGCTGATCCCCGTCGCTGTGAATCCAAAAAGTTTGGTG
GTCCTGGTGCCCGTGCTCGCTACCAGAAATCTTACCGATAA

Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000014176 ortholog_one2one 1 retrogene
retro_acar_194,
Ailuropoda melanoleuca ENSAMEG00000008470 ortholog_one2one 8 retrogenes
retro_amel_1105, retro_amel_1143, retro_amel_1463, retro_amel_1790, retro_amel_1865, retro_amel_306, retro_amel_668, retro_amel_840,
Bos taurus ENSBTAG00000021093 ortholog_one2many 3 retrogenes
retro_btau_1509, retro_btau_167, retro_btau_441,
Callithrix jacchus ENSCJAG00000014170 ortholog_one2one 6 retrogenes
retro_cjac_2641, retro_cjac_2737, retro_cjac_3019, retro_cjac_885, retro_cjac_905, retro_cjac_949,
Cavia porcellus ENSCPOG00000011359 ortholog_one2one 3 retrogenes
retro_cpor_1266, retro_cpor_1408, retro_cpor_1515,
Felis catus ENSFCAG00000010743 possible_ortholog 4 retrogenes
retro_fcat_1258, retro_fcat_1709, retro_fcat_1806, retro_fcat_1976,
Homo sapiens ENSG00000105193 ortholog_one2one 11 retrogenes
retro_hsap_118, retro_hsap_1658, retro_hsap_1736, retro_hsap_1977, retro_hsap_2064, retro_hsap_2230, retro_hsap_2327, retro_hsap_3593, retro_hsap_4209, retro_hsap_787, retro_hsap_813,
Gorilla gorilla ENSGGOG00000014414 possible_ortholog 10 retrogenes
retro_ggor_110, retro_ggor_1250, retro_ggor_1344, retro_ggor_1664, retro_ggor_1766, retro_ggor_193, retro_ggor_2423, retro_ggor_2819, retro_ggor_652, retro_ggor_667,
Loxodonta africana ENSLAFG00000001541 ortholog_one2one 1 retrogene
retro_lafr_1191,
Macaca mulatta ENSMMUG00000019370 ortholog_one2many 8 retrogenes
retro_mmul_1018, retro_mmul_1080, retro_mmul_1175, retro_mmul_1219, retro_mmul_1403, retro_mmul_20, retro_mmul_767, retro_mmul_862,
Monodelphis domestica ENSMODG00000013545 ortholog_one2one 4 retrogenes
retro_mdom_1668, retro_mdom_1823, retro_mdom_815, retro_mdom_856,
Mustela putorius furo ENSMPUG00000017722 ortholog_one2one 5 retrogenes
retro_mputfur_283, retro_mputfur_322, retro_mputfur_447, retro_mputfur_701, retro_mputfur_985,
Mus musculus ENSMUSG00000037563 ortholog_one2one 11 retrogenes
retro_mmus_1780, retro_mmus_2058, retro_mmus_2125, retro_mmus_2697, retro_mmus_2727, retro_mmus_3091, retro_mmus_3173, retro_mmus_3198, retro_mmus_3202, retro_mmus_700, retro_mmus_771,
Nomascus leucogenys ENSNLEG00000014388 possible_ortholog 3 retrogenes
retro_nleu_1266, retro_nleu_248, retro_nleu_46,
Otolemur garnettii ENSOGAG00000004497 possible_ortholog 4 retrogenes
retro_ogar_1229, retro_ogar_1309, retro_ogar_1313, retro_ogar_98,
Oreochromis niloticus ENSONIG00000000006 ortholog_one2one 1 retrogene
retro_onil_52,
Pelodiscus sinensis ENSPSIG00000016930 ortholog_one2one 1 retrogene
retro_psin_55,
Rattus norvegicus ENSRNOG00000019578 ortholog_one2one 3 retrogenes
retro_rnor_10, retro_rnor_1823, retro_rnor_302,
Sus scrofa ENSSSCG00000010712 possible_ortholog 1 retrogene
retro_sscr_731,
Sus scrofa ENSSSCG00000020817 ortholog_one2one 3 retrogenes
retro_sscr_478, retro_sscr_5, retro_sscr_723,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mluc_481 63.73 69.18
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2. retro_mluc_1906 93.15 100.00
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3. retro_mluc_2096 63.76 99.32
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4. retro_mluc_2174 57.30 60.96
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5. retro_mluc_2529 65.69 69.18
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Download FASTA sequences of all ENSMLUG00000029089 retrocopies