Parental gene:

ENSGGOG00000013695

Aliases:None
Description:None
Organism:Gorilla (Gorilla gorilla)
Coordinates:12:51023008..51057191(+)


>ENSGGOG00000013695
ATGGCGGCCTCAGCAAAAAAGAAGAATAAGAAGGGGAAGACTATCTCCCTAACAGACTTTCTGGCTGAGGATGGGGGTAC
TGGTGGAGGAAGCACCTATGTTTCCAAACCAGTCAGCTGGGCTGATGAAACGGATGACCTGGAAGGAGATGTTTCGACAA
CTTGGCACAGTAACGATGACGATGTGTATAGGGCGCCTCCAATTGACCGTTCCATCCTTCCCACTGCTCCACGGGCTGCT
CGGGAACCCAATATCGACCGGAGCCGTCTTCCCAAATCGCCACCCTACACTGCTTTTCTAGGAAACCTACCCTATGATGT
TACAGAAGAGTCAATTAAGGAATTCTTTCGAGGATTAAATATCAGTGCAGTGCGTTTACCACGTGAACCCAGCAATCCAG
AGAGGTTGAAAGGTTTTGGTTATGCTGAATTTGAGGACCTGGATTCCCTGCTCAGTGCCCTGAGTCTCAATGAAGAGTCT
CTAGGTAACAGGAGAATTCGAGTGGACGTTGCTGATCAAGCACAGGATAAAGACAGGGATGATCGTTCTTTTGGCCGTGA
TAGAAATCGGGATTCTGACAAAACAGATACAGACTGGAGGGCTCGTCCTGCTACAGACACCTTTGATGACTACCCACCTA
GAAGAGGTGATGATAGCTTTGGAGACAAGTATCGAGATCGTTATGATTCAGACCGGTATCGGGATGGGTATCGGGATGGG
TATCGGGATGGCCCACGCCGGGATATGGATCGATATGGTGGCCGGGATCGCTATGATGACCGAGGCAGCAGAGACTATGA
TAGAGGCTATGATTCCCGGATAGGCAGTGGCAGAAGAGCATTTGGCAGTGGGTATCGCAGGGATGATGACTACAGAGGAG
GCGGGGACCGCTATGAAGACCGATATGACAGGCGGGATGATCGGTCGTGGAGCTCCAGAGATGATTACTCTCGGGATGAT
TATAGGCGTGATGATAGAGGTCCCCCACAAAGACCCAAACTGAATCTAAAGCCTCGGAGTACTCCTAAGGAAGATGATTC
CTCTGCTAGTACCTCCCAGTCCACTCGAGCTGCTTCTATATTTGGAGGGGCAAAGCCTGTTGACACAGCTGCTAGAGAAA
GAGAAGTAGAAGAACGGCTACAGAAGGAACAAGAGAAGTTGCAGCGTCAGCTGGATGAGCCAAAACTAGAACGACGGCCT
CGGGAGAGACACCCAAGCTGGCGAAGTGAAGAAACTCAGGAACGGGAACGGTCGAGGACAGGAAGTGAGTCATCACAAAC
TGGGACCTCCACCACATCTGGCAGAAATGCACGAAGGAGAGAGAGTGAGAAGTCTCTAGAAAATGAAACACTCAATAAGG
AGGAAGATTGCCACTCTCCAACTTCTAAACCTCCCAAACCTGATCAGCCCCTAAAGGTAATGCCAGCCCCTCCACCAAAG
GAGAATGCTTGGGTGAAGCGAAGTTCTAACCCTCCTGCTCGATCTCAGAGCTCAGACACAGAGCAGCAATCCCCTACAAG
TGGTGGGGGAAAAGTAGCTCCAGCTCAACCATCTGAGGAAGGACCAGGAAGGAAAGATGAAAATAAAGTAGATGGGATGA
ATGCCCCAAAAGGCCAAACTGGGAACTCTAGCCGTGGTCCAGGAGACGGAGGGAACAGAGACCACTGGAAGGAGTCAGAT
AGGAAAGATGGCAAAAAGGATCAAGACTCCAGATCTGCACCTGAGCCAAAGAAACCTGAGGAAAATCCAGCTTCCAAGTT
CAGTTCTGCAAGCAAGTATGCTGCTCTCTCTGTTGATGGTGAAGATGAAAATGAGGGAGAAGATTATGCCGAATAG

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 105 .16 RPM
SRP007412_cerebellum 94 .32 RPM
SRP007412_heart 51 .50 RPM
SRP007412_kidney 153 .86 RPM
SRP007412_liver 78 .11 RPM
SRP007412_testis 171 .98 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000012023 possible_ortholog 2 retrogenes
retro_amel_1107, retro_amel_559,
Canis familiaris ENSCAFG00000007117 possible_ortholog 2 retrogenes
retro_cfam_1447, retro_cfam_936,
Choloepus hoffmanni ENSCHOG00000001608 possible_ortholog 2 retrogenes
retro_chof_1310, retro_chof_366,
Callithrix jacchus ENSCJAG00000018176 ortholog_one2many 2 retrogenes
retro_cjac_1717, retro_cjac_2001,
Cavia porcellus ENSCPOG00000005595 ortholog_many2many 3 retrogenes
retro_cpor_278, retro_cpor_752, retro_cpor_937,
Homo sapiens ENSG00000063046 ortholog_one2many 7 retrogenes
retro_hsap_1686, retro_hsap_2639, retro_hsap_2698, retro_hsap_3767, retro_hsap_4196, retro_hsap_4848, retro_hsap_4891,
Gorilla gorilla ENSGGOG00000005284 within_species_paralog 1 retrogene
retro_ggor_1598,
Loxodonta africana ENSLAFG00000009534 possible_ortholog 1 retrogene
retro_lafr_294,
Macropus eugenii ENSMEUG00000012341 ortholog_one2many 2 retrogenes
retro_meug_1054, retro_meug_585,
Macaca mulatta ENSMMUG00000001062 possible_ortholog 5 retrogenes
retro_mmul_1428, retro_mmul_2384, retro_mmul_2589, retro_mmul_731, retro_mmul_783,
Mus musculus ENSMUSG00000058655 ortholog_one2many 1 retrogene
retro_mmus_3686,
Nomascus leucogenys ENSNLEG00000017727 ortholog_one2many 3 retrogenes
retro_nleu_2371, retro_nleu_2601, retro_nleu_721,
Pongo abelii ENSPPYG00000025848 ortholog_one2many 7 retrogenes
retro_pabe_1388, retro_pabe_1560, retro_pabe_2283, retro_pabe_260, retro_pabe_3532, retro_pabe_3768, retro_pabe_506,
Rattus norvegicus ENSRNOG00000010103 possible_ortholog 2 retrogenes
retro_rnor_2467, retro_rnor_2972,
Ictidomys tridecemlineatus ENSSTOG00000006800 ortholog_one2many 1 retrogene
retro_itri_604,
Tupaia belangeri ENSTBEG00000005423 ortholog_one2many 2 retrogenes
retro_tbel_2363, retro_tbel_4167,
Tarsius syrichta ENSTSYG00000012880 possible_ortholog 1 retrogene
retro_tsyr_452,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ggor_1233 84.17 71.36
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2. retro_ggor_1263 84.17 71.36
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3. retro_ggor_1882 73.80 70.87
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4. retro_ggor_1883 73.53 65.79
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5. retro_ggor_3024 82.23 64.32
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Download FASTA sequences of all ENSGGOG00000013695 retrocopies