Parental gene:

DPPA4, ENSG00000121570

Aliases:DPPA4, 2410091M23Rik
Description:developmental pluripotency associated 4 [Source:HGNC Symbol;Acc:19200]
Organism:Human (Homo sapiens)
Coordinates:3:109044987..109056419(-)


>ENSG00000121570
ATGTTGCGAGGCTCCGCTTCTTCTACAAGTATGGAGAAGGCAAAAGGCAAGGAGTGGACCTCCACAGAGAAGTCGAGGGA
AGAGGATCAGCAGGCTTCTAATCAACCAAATTCAATTGCTTTGCCAGGAACATCAGCAAAGAGAACCAAAGAAAAAATGT
CTATCAAAGGCAGTAAAGTGCTCTGCCCTAAGAAAAAGGCAGAGCACACTGACAACCCCAGACCTCAGAAGAAGATACCA
ATCCCTCCATTACCTTCTAAACTGCCACCTGTTAATCTGATTCACCGGGACATTCTGCGGGCCTGGTGCCAACAATTGAA
GCTGAGCTCCAAAGGCCAGAAATTGGATGCATATAAGCGCCTGTGTGCCTTTGCCTACCCAAATCAAAAGGATTTTCCTA
GCACAGCAAAAGAGGCCAAAATCCGGAAATCATTGCAAAAAAAATTAAAGGTGGAAAAGGGGGAAACGTCCCTGCAAAGT
TCTGAGACACATCCTCCTGAAGTGGCTCTTCCTCCTGTGGGGGAGCCGCCTGCCCTGGAAAATTCCACTGCTCTCCTTGA
GGGAGTTAATACAGTTGTGGTGACAACTTCTGCCCCAGAGGCTTTGCTGGCCTCCTGGGCGAGAATTTCAGCCAGGGCGA
GGACACCAGAGGCAGTGGAATCTCCACAAGAGGCCTCTGGTGTCAGGTGGTGTGTGGTCCATGGGAAAAGTCTCCCTGCA
GACACAGATGGTTGGGTTCACCTGCAGTTTCATGCTGGTCAAGCCTGGGTTCCAGAAAAGCAAGAAGGGAGAGTGAGTGC
ACTCTTCTTGCTTCCTGCCTCCAATTTTCCACCCCCGCACCTTGAAGACAATATGTTGTGCCCCAAATGTGTTCACAGGA
ACAAGGTCTTAATAAAAAGCCTCCAATGGGAATAG

Library Parental gene expression (RPM)
bodymap2_adipose 0 .02 RPM
bodymap2_adrenal 0 .08 RPM
bodymap2_brain 0 .19 RPM
bodymap2_breast 0 .00 RPM
bodymap2_colon 0 .00 RPM
bodymap2_heart 0 .00 RPM
bodymap2_kidney 0 .00 RPM
bodymap2_liver 0 .55 RPM
bodymap2_lung 0 .19 RPM
bodymap2_lymph_node 0 .09 RPM
bodymap2_ovary 0 .00 RPM
bodymap2_prostate 0 .00 RPM
bodymap2_skeletal_muscle 0 .00 RPM
bodymap2_testis 10 .41 RPM
bodymap2_thyroid 0 .11 RPM
bodymap2_white_blood_cells 1 .10 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000010335 ortholog_one2many 5 retrogenes
retro_cfam_1332, retro_cfam_1540, retro_cfam_1905, retro_cfam_1934, retro_cfam_996,
Callithrix jacchus ENSCJAG00000020171 ortholog_one2many 2 retrogenes
retro_cjac_1334, retro_cjac_1491,
Echinops telfairi ENSETEG00000002722 ortholog_one2one 1 retrogene
retro_etel_312,
Homo sapiens ENSG00000163530 within_species_paralog 3 retrogenes
retro_hsap_1642, retro_hsap_2903, retro_hsap_357,
Gorilla gorilla ENSGGOG00000015121 ortholog_one2one 2 retrogenes
retro_ggor_1970, retro_ggor_723,
Loxodonta africana ENSLAFG00000016804 ortholog_one2one 1 retrogene
retro_lafr_456,
Myotis lucifugus ENSMLUG00000016423 ortholog_one2one 1 retrogene
retro_mluc_973,
Macaca mulatta ENSMMUG00000016901 ortholog_one2many 1 retrogene
retro_mmul_1515,
Monodelphis domestica ENSMODG00000018083 ortholog_one2many 3 retrogenes
retro_mdom_1057, retro_mdom_1478, retro_mdom_999,
Mustela putorius furo ENSMPUG00000010206 ortholog_one2one 1 retrogene
retro_mputfur_800,
Mus musculus ENSMUSG00000058550 ortholog_one2many 3 retrogenes
retro_mmus_1907, retro_mmus_2085, retro_mmus_3656,
Nomascus leucogenys ENSNLEG00000004030 ortholog_one2one 3 retrogenes
retro_nleu_2888, retro_nleu_3018, retro_nleu_388,
Oryctolagus cuniculus ENSOCUG00000016435 ortholog_one2many 1 retrogene
retro_ocun_114,
Pongo abelii ENSPPYG00000013565 ortholog_one2one 3 retrogenes
retro_pabe_2316, retro_pabe_2349, retro_pabe_770,
Pan troglodytes ENSPTRG00000015200 ortholog_one2one 2 retrogenes
retro_ptro_1923, retro_ptro_616,
Pteropus vampyrus ENSPVAG00000010677 ortholog_one2one 1 retrogene
retro_pvam_1237,
Rattus norvegicus ENSRNOG00000025404 ortholog_one2many 4 retrogenes
retro_rnor_2750, retro_rnor_2996, retro_rnor_861, retro_rnor_862,
Sarcophilus harrisii ENSSHAG00000017398 ortholog_one2many 1 retrogene
retro_shar_542,
Tursiops truncatus ENSTTRG00000009508 ortholog_one2one 1 retrogene
retro_ttru_1772,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_893 64.80 98.68
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Download FASTA sequences of all ENSG00000121570 retrocopies