Parental gene: | RBBP4, ENSETEG00000020008 |
| Aliases: | None |
| Description: | retinoblastoma binding protein 4 [Source:HGNC Symbol;Acc:9887] |
| Organism: | Lesser hedgehog tenrec (Echinops telfairi) |
| Coordinates: | GeneScaffold_7217:57079..66407(+) |
>ENSETEG00000020008
ATGGCCGACAAGGAAGCAGCCTTTGATGACGCCGTGGAAGAACGCGTGATCAACGAGGAGTACAAGATATGGAAGAAGAA
CACCCCTTTTCTTTACGATTTGGTGATGACCCATGCTCTGGAGTGGCCCAGCCTAACTGCACAGTGGCTTCCAGATGTGA
CCAGACCAGAAGGGAAAGATTTCAGCATTCATCGACTTGTCTTGGGCACACATACATCGGACGAGCAAAACCACCTTGTG
ATAGCCAGTGTGCAGCTCCCTAATGATGATGCTCAGTTTGATGCCTCACACTACGACAGTGAGAAAGGAGAATTTGGAGG
TTTTGGCTCTGTCAGTGGCAAGATTGAAATAGAAATAAAGATCAATCACGAAGGAGAAGTCAACCGGGCCCGTTACATGC
CCCAGAACCCTTGCATCATTGCAACCAAGACTCCATCCAGTGATGTTCTTGTTTTTGACTACACGAAACACCCTTCTAAA
CCAGACCCTTCTGGAGAGTGTAACCCAGACTTGCGTCTCCGCGGACATCAGAAGGAAGGCTATGGACTTTCGTGGAACCC
AAATCTCAGCGGCCACTTGCTTAGTGCTTCAGATGATCATACCATCTGCCTGTGGGATATCAGTGCTGTTCCAAAGGAAG
GAAAAGTGGTGGATGCAAAAACCATCTTCACTGGACATACTGCAGTAGTTGAAGATGTTTCCTGGCATCTGCTTCATGAG
TCTCTGTTTGGTTCGGTTGCTGATGATCAGAAGCTCATGATCTGGGATACTCGTTCAAACAATACTTCCAAACCAAGCCA
CTCAGTTGATGCTCACACTGCTGAAGTGAACTGCCTTTCTTTCAATCCTTATAGTGAATTCATTCTTGCCACAGGATCCG
CTGACAAGACTGTTGCTTTGTGGGATCTAAGAAATCTGAAACTCAAGTTGCATTCCTTTGAATCACATAAGGATGAAATA
TTCCAGGTTCAGTGGTCGCCTCACAATGAAACCATTTTGGCTTCCAGTGGTACTGATCGTAGACTGAATGTCTGGGACTT
AAGTAAAATTGGAGAGGAACAATCCCCAGAAGATGCAGAAGATGGACCACCAGAGTTGTTGTTTATTCATGGTGGTCACA
CTGCCAAGATATCTGACTTCTCCTGGAATCCCAATGAACCTTGGGTGATTTGTTCTGTATCAGAAGATAACATCATGCAA
GTGTGGCAGATGGCAGAGAACATTTATAATGATGAAGACCCTGAAGGAAGTGTGGATCCAGAAGGACAGGGGTCCTAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000005904 | ortholog_one2one | 2 retrogenes | |
| Canis familiaris | ENSCAFG00000010527 | ortholog_one2one | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000004066 | ortholog_one2one | 6 retrogenes | |
| Callithrix jacchus | ENSCJAG00000001021 | ortholog_one2one | 7 retrogenes | |
| Cavia porcellus | ENSCPOG00000015352 | ortholog_one2one | 3 retrogenes | |
| Equus caballus | ENSECAG00000022784 | ortholog_one2one | 1 retrogene | |
| Felis catus | ENSFCAG00000027017 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000162521 | ortholog_one2one | 6 retrogenes | |
| Macropus eugenii | ENSMEUG00000014379 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000000749 | ortholog_one2one | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000009940 | ortholog_one2one | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000015214 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000057236 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000002805 | ortholog_one2one | 6 retrogenes | |
| Petromyzon marinus | ENSPMAG00000007189 | ortholog_one2many | 1 retrogene | |
| Pongo abelii | ENSPPYG00000001588 | ortholog_one2one | 6 retrogenes | |
| Pteropus vampyrus | ENSPVAG00000010981 | ortholog_one2one | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000021492 | ortholog_one2one | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000010923 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000012011 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_etel_676 | 87.11 | 60.00 | Please wait, loading  |
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| 2. | retro_etel_1088 | 72.37 | 59.29 | Please wait, loading |
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| 3. | retro_etel_1462 | 92.91 | 62.82 | Please wait, loading |
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| 4. | retro_etel_1877 | 74.34 | 51.53 | Please wait, loading |
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Download FASTA sequences of all ENSETEG00000020008 retrocopies