Parental gene:

ENSDORG00000002250

Aliases:None
Description:None
Organism:Kangaroo rat (Dipodomys ordii)
Coordinates:GeneScaffold_3670:850..5223(+)


>ENSDORG00000002250
ATGGCGGTAGGCAAGAACAAGCGCCTTACAGGCGGCAAAAAGGGAGCCAAGAAGAAAGTGGTTGATCCATTTTCTAAGAA
GGATTGGTATGATGTGAAAGCACCAGCCATGTTCAATATAAGGAATATTGGGAAAACACTAGTCACGAGGACTCAAGGAA
CCAAAATCGCATCTGATGGCCTCAAGGGTCGGGTGTTTGAAGTGAGCCTTGCTGATCTGCAGAATGATGAAGTCGCGTTT
AGAAAATTCAAGCTAATTACTGAGGACGTTCAGGGCAAGAACTGTCTGACCAACTTCCATGGCATGGATCTCACCCGAGA
CAAAATGTGCTCTATGGTCAAAAAGTGGCAGACCATGATTGAAGCTCATGTTGATGTCAAGACTACAGATGGTTATTTGC
TTCGTCTGTTCTGTGTTGGTTTCACTAAAAAACGCAACAATCAGATCCGCAAGACCTCCTATGCTCAGCATCAGCAGGTC
CGCCAAATCCGGAAGAAGATGATGGAAATCATGACCCGAGAAGTACAGACAAATGACTTGAAAGAAGTAGTTAATAAATT
GATTCCAGACAGCATTGGGAAAGACATAGAAAAGGCTTGCCAGTCTATTTATCCACTTCATGATGTCTTCGTTAGAAAAG
TAAAAATGCTGAAGAAGCCCAAGTTTGAATTGGGAAAACTCATGGAGCTTCATGGTGAAGGTGGTAGTTCTGGAAAAGCT
ACTGGTGACGAGACTGGTGCTAAAGTCGAGCGAGCTGATGGATACGAACCACCAGTCCAAGAATCTGTTTAA

Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000009908 possible_ortholog 3 retrogenes
Canis familiaris ENSCAFG00000007990 possible_ortholog 7 retrogenes
Callithrix jacchus ENSCJAG00000002268 possible_ortholog 7 retrogenes
Cavia porcellus ENSCPOG00000015569 possible_ortholog 9 retrogenes
Equus caballus ENSECAG00000009573 possible_ortholog 6 retrogenes
Erinaceus europaeus ENSEEUG00000004994 ortholog_one2one 4 retrogenes
Felis catus ENSFCAG00000031288 possible_ortholog 5 retrogenes
Gorilla gorilla ENSGGOG00000003182 possible_ortholog 2 retrogenes
Loxodonta africana ENSLAFG00000017660 possible_ortholog 3 retrogenes
Myotis lucifugus ENSMLUG00000014788 possible_ortholog 8 retrogenes
Macaca mulatta ENSMMUG00000021821 possible_ortholog 1 retrogene
Monodelphis domestica ENSMODG00000000969 ortholog_one2one 6 retrogenes
Mustela putorius furo ENSMPUG00000007139 possible_ortholog 8 retrogenes
Mus musculus ENSMUSG00000028081 ortholog_one2many 2 retrogenes
Oryctolagus cuniculus ENSOCUG00000007011 possible_ortholog 1 retrogene
Rattus norvegicus ENSRNOG00000011893 ortholog_one2many 1 retrogene
Sarcophilus harrisii ENSSHAG00000015088 ortholog_one2many 2 retrogenes
Sus scrofa ENSSSCG00000009019 possible_ortholog 3 retrogenes
Ictidomys tridecemlineatus ENSSTOG00000024203 possible_ortholog 1 retrogene
Tupaia belangeri ENSTBEG00000002963 possible_ortholog 98 retrogenes
retro_tbel_1005, retro_tbel_11, retro_tbel_1119, retro_tbel_116, retro_tbel_1232, retro_tbel_1318, retro_tbel_133, retro_tbel_137, retro_tbel_1375, retro_tbel_1378, retro_tbel_1383, retro_tbel_1417, retro_tbel_1421, retro_tbel_1509, retro_tbel_1686, retro_tbel_1698, retro_tbel_172, retro_tbel_1720, retro_tbel_1721, retro_tbel_1744, retro_tbel_1814, retro_tbel_1829, retro_tbel_1856, retro_tbel_1896, retro_tbel_1948, retro_tbel_1960, retro_tbel_1999, retro_tbel_206, retro_tbel_2200, retro_tbel_2306, retro_tbel_2463, retro_tbel_2483, retro_tbel_2510, retro_tbel_2626, retro_tbel_2654, retro_tbel_2657, retro_tbel_2745, retro_tbel_2759, retro_tbel_2760, retro_tbel_2764, retro_tbel_281, retro_tbel_2857, retro_tbel_2957, retro_tbel_2959, retro_tbel_3114, retro_tbel_317, retro_tbel_3212, retro_tbel_3255, retro_tbel_3259, retro_tbel_3299, retro_tbel_336, retro_tbel_3372, retro_tbel_3416, retro_tbel_3471, retro_tbel_3486, retro_tbel_3513, retro_tbel_3558, retro_tbel_3613, retro_tbel_3631, retro_tbel_3655, retro_tbel_3705, retro_tbel_373, retro_tbel_375, retro_tbel_3755, retro_tbel_3786, retro_tbel_3815, retro_tbel_3823, retro_tbel_3832, retro_tbel_386, retro_tbel_3882, retro_tbel_39, retro_tbel_3947, retro_tbel_3966, retro_tbel_399, retro_tbel_4116, retro_tbel_4144, retro_tbel_4147, retro_tbel_4211, retro_tbel_4220, retro_tbel_423, retro_tbel_4294, retro_tbel_4304, retro_tbel_4347, retro_tbel_438, retro_tbel_4428, retro_tbel_445, retro_tbel_4579, retro_tbel_598, retro_tbel_619, retro_tbel_623, retro_tbel_671, retro_tbel_859, retro_tbel_90, retro_tbel_912, retro_tbel_92, retro_tbel_928, retro_tbel_956, retro_tbel_973,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_dord_95 71.81 56.27
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2. retro_dord_142 75.89 52.85
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3. retro_dord_168 76.09 52.09
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4. retro_dord_193 99.24 100.00
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5. retro_dord_209 67.80 66.54
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6. retro_dord_229 70.00 56.27
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7. retro_dord_314 65.43 70.72
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8. retro_dord_380 95.04 98.86
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9. retro_dord_752 82.95 66.16
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10. retro_dord_757 59.14 68.82
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Download FASTA sequences of all ENSDORG00000002250 retrocopies