Parental gene: | ENSCJAG00000031971 |
| Aliases: | None |
| Description: | None |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 1:41745524..41755964(-) |
>ENSCJAG00000031971
ATGGCGGACGGCGGCGGCGGCGGGGGAACGGGCGCGGTGGGCGGCGGCGGAGCTGGCCAGGCCTCTGCCGGGGCAGCAAC
GGGCGCTACTGGGGCCAGCGGAGGCGGTGGCCCCATCAACCCCGCCTCGCTGCCTCCCGGCGACCCGCAGCTCATCGCTC
TCATCGTGGAGCAGCTCAAGAGCCGGGGCCTCTTTGACAGCTTCCGCCGGGACTGCCTGGCCGACGTGGACACAAAGCCA
GCTTACCAAAACCTGAGGCAGAAAGTGGATAATTTTGTGTCAACACATCTGGACAAGCAGGAATGGAATCCTACGATGAA
CAAAAACCAATTGCGAAATGGTCTGAGGCAGAGTGTGGTTCAGTCAGGGATGTTGGAAGCTGGAGTAGACAGGATTATTT
CTCAGGTGGTAGATCCAAAACTAAACCACATCTTCAGGCCACAAATAGAACGAGCAATTCATGAGTTCCTGGCAGCCCAG
AAAAAAGCAGCTGTGCCAGCACCCCCTCCAGAGCCCGACGGCCAGGACCCACCAGCTCCATCCCAGGACACTTCCTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_colon | 4 .77 RPM |
| SRP051959_heart | 7 .00 RPM |
| SRP051959_kidney | 8 .16 RPM |
| SRP051959_liver | 6 .58 RPM |
| SRP051959_lung | 6 .07 RPM |
| SRP051959_lymph_node | 4 .38 RPM |
| SRP051959_skeletal_muscle | 6 .66 RPM |
| SRP051959_spleen | 5 .63 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000034598 | ortholog_one2one | 1 retrogene | |
| Canis familiaris | ENSCAFG00000016776 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000145919 | ortholog_one2many | 3 retrogenes | |
| Gorilla gorilla | ENSGGOG00000010925 | ortholog_one2many | 2 retrogenes | |
| Microcebus murinus | ENSMICG00000002626 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000013793 | ortholog_one2many | 2 retrogenes | |
| Mus musculus | ENSMUSG00000044502 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000000476 | ortholog_one2many | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000014283 | ortholog_one2many | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000001107 | ortholog_one2one | 3 retrogenes | |
| Pongo abelii | ENSPPYG00000016057 | ortholog_one2one | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000017544 | ortholog_one2many | 2 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000013505 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000014046 | ortholog_one2one | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000007617 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000000384 | ortholog_one2one | 2 retrogenes | |
| Vicugna pacos | ENSVPAG00000004260 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_953 | 83.61 | 98.38 | Please wait, loading  |
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| 2. | retro_cjac_1154 | 64.29 | 82.16 | Please wait, loading |
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| 3. | retro_cjac_1515 | 81.22 | 96.22 | Please wait, loading |
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| 4. | retro_cjac_1536 | 98.39 | 100.00 | Please wait, loading |
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Download FASTA sequences of all ENSCJAG00000031971 retrocopies