Parental gene:

CLNS1A, ENSCJAG00000014927

Aliases:None
Description:chloride channel, nucleotide-sensitive, 1A [Source:HGNC Symbol;Acc:2080]
Organism:Marmoset (Callithrix jacchus)
Coordinates:11:60618397..60645464(+)


>ENSCJAG00000014927
ATGAGCTTCCTCAAAAGTTTCCCGCCGCCTGGGCCGGCGGAGGGGCTCCTGCGGCAGCAGCCAGACACCGAGGCTGTGCT
GAACGGGAAGGGCCTTGGCACCGGTACCCTTTACATCGCTGAGAGCCGCCTGTCTTGGTTAGATGGCTCCGGATTAGGAT
TCTCGCTGGAATACCCCACCATTAGCTTACATGCATTGTCCAGGGACAGAAGTGACTGTCTGGGAGAGCACTTGTATGTT
ATGGTGAATGCCAAATTTGAAGAAGAATCAAAAGAATCTGTTGCTGATGAAGAAGAAGAAGACAGTGATGATGATGTTGA
ACCTATTACTGAATTTAGATTTGTGCCTAGTGATAAATCAGCATTGGAGGCAATGTTCACTGCAATGTGCGAATGCCAGG
CCTTGCATCCAGATCCTGAGGATGAGGATTCAGATGACTACGATGGAGAAGAATATGATGTGGAAGCACATGAACAAGGG
CAGGGGGATATCCCTACATTTTACACCTATGAAGAAGGATTATCCCATCTAACAGCAGAAGGCCAAGCCACATTGGAGAG
ATTAGAAGGAATGCTTTCTCAGTCCGTGAGCAGCCAGTATAATATGGCTGGGGTCAGGACAGAAGATTCAATAAGAGATT
ATGAAGATGGTATGGAGGTGGATACCACACCAACAGTTGCTGGACAGTTTGAGGATGCAGATGTTGATCACTGA

Library Parental gene expression (RPM)
SRP051959_colon 14 .31 RPM
SRP051959_heart 17 .86 RPM
SRP051959_kidney 20 .50 RPM
SRP051959_liver 17 .48 RPM
SRP051959_lung 18 .68 RPM
SRP051959_lymph_node 20 .57 RPM
SRP051959_skeletal_muscle 17 .82 RPM
SRP051959_spleen 23 .26 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000019930 ortholog_one2one 1 retrogene
retro_btau_376,
Canis familiaris ENSCAFG00000004900 possible_ortholog 6 retrogenes
retro_cfam_1112, retro_cfam_1448, retro_cfam_255, retro_cfam_327, retro_cfam_720, retro_cfam_727,
Choloepus hoffmanni ENSCHOG00000007254 possible_ortholog 1 retrogene
retro_chof_1685,
Cavia porcellus ENSCPOG00000005260 ortholog_one2many 1 retrogene
retro_cpor_67,
Dasypus novemcinctus ENSDNOG00000008188 possible_ortholog 1 retrogene
retro_dnov_477,
Felis catus ENSFCAG00000026321 possible_ortholog 1 retrogene
retro_fcat_736,
Homo sapiens ENSG00000074201 ortholog_one2one 2 retrogenes
retro_hsap_3010, retro_hsap_3595,
Gorilla gorilla ENSGGOG00000003091 ortholog_one2one 1 retrogene
retro_ggor_2084,
Macropus eugenii ENSMEUG00000005935 ortholog_one2many 4 retrogenes
retro_meug_1825, retro_meug_2097, retro_meug_783, retro_meug_929,
Myotis lucifugus ENSMLUG00000024623 possible_ortholog 2 retrogenes
retro_mluc_1501, retro_mluc_1507,
Mustela putorius furo ENSMPUG00000015944 possible_ortholog 1 retrogene
retro_mputfur_435,
Mus musculus ENSMUSG00000025439 ortholog_one2one 1 retrogene
retro_mmus_1984,
Nomascus leucogenys ENSNLEG00000016699 ortholog_one2one 2 retrogenes
retro_nleu_300, retro_nleu_756,
Oryctolagus cuniculus ENSOCUG00000024393 ortholog_one2many 1 retrogene
retro_ocun_1303,
Pongo abelii ENSPPYG00000003712 ortholog_one2one 1 retrogene
retro_pabe_2494,
Sorex araneus ENSSARG00000009460 ortholog_one2one 2 retrogenes
retro_sara_247, retro_sara_682,
Ictidomys tridecemlineatus ENSSTOG00000027980 ortholog_one2one 3 retrogenes
retro_itri_239, retro_itri_319, retro_itri_490,
Tupaia belangeri ENSTBEG00000001316 possible_ortholog 1 retrogene
retro_tbel_2975,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_4085 100.00 51.05
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Download FASTA sequences of all ENSCJAG00000014927 retrocopies