Parental gene:

CLNS1A, ENSG00000074201

Aliases:CLNS1A, CLCI, CLNS1B, ICln
Description:chloride channel, nucleotide-sensitive, 1A [Source:HGNC Symbol;Acc:2080]
Organism:Human (Homo sapiens)
Coordinates:11:77225980..77348850(-)


>ENSG00000074201
ATGAGCTTCCTCAAAAGTTTCCCGCCGCCTGGGCCAGCGGAGGGGCTCCTGCGGCAGCAGCCAGACACTGAGGCTGTGCT
GAACGGGAAGGGCCTCGGCACTGGTACCCTTTACATCGCTGAGAGCCGCCTGTCTTGGTTAGATGGCTCTGGATTAGGAT
TCTCACTGGAATACCCCACCATTAGTTTACATGCATTATCCAGGGACCGAAGTGACTGTCTAGGAGAGCATTTGTATGTT
ATGGTGAATGCCAAATTTGAAGAAGAATCAAAAGAACCTGTTGCTGATGAAGAAGAGGAAGACAGTGATGATGATGTTGA
ACCTATTACTGAATTTAGATTTGTGCCTAGTGATAAATCAGCGTTGGAGGCAATGTTCACTGCAATGTGCGAATGCCAGG
CCTTGCATCCAGATCCTGAGGATGAGGATTCAGATGACTACGATGGAGAAGAATATGATGTGGAAGCACATGAACAAGGA
CAGGGGGACATCCCTACATTTTACACCTATGAAGAAGGATTATCCCATCTAACAGCAGAAGGCCAAGCCACACTGGAGAG
ATTAGAAGGAATGCTTTCTCAGTCTGTGAGCAGCCAGTATAATATGGCTGGGGTCAGGACAGAAGATTCAATAAGAGATT
ATGAAGATGGGATGGAGGTGGATACCACACCAACAGTTGCTGGACAGTTTGAGGATGCAGATGTTGATCACTGA

Library Parental gene expression (RPM)
bodymap2_adipose 36 .12 RPM
bodymap2_adrenal 44 .71 RPM
bodymap2_brain 57 .29 RPM
bodymap2_breast 40 .29 RPM
bodymap2_colon 47 .70 RPM
bodymap2_heart 31 .03 RPM
bodymap2_kidney 36 .42 RPM
bodymap2_liver 35 .78 RPM
bodymap2_lung 34 .32 RPM
bodymap2_lymph_node 44 .70 RPM
bodymap2_ovary 94 .28 RPM
bodymap2_prostate 53 .64 RPM
bodymap2_skeletal_muscle 22 .97 RPM
bodymap2_testis 63 .03 RPM
bodymap2_thyroid 67 .11 RPM
bodymap2_white_blood_cells 78 .10 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000019930 ortholog_one2one 1 retrogene
retro_btau_376,
Canis familiaris ENSCAFG00000004900 possible_ortholog 6 retrogenes
retro_cfam_1112, retro_cfam_1448, retro_cfam_255, retro_cfam_327, retro_cfam_720, retro_cfam_727,
Callithrix jacchus ENSCJAG00000014927 ortholog_one2one 1 retrogene
retro_cjac_4085,
Cavia porcellus ENSCPOG00000005260 ortholog_one2many 1 retrogene
retro_cpor_67,
Felis catus ENSFCAG00000026321 possible_ortholog 1 retrogene
retro_fcat_736,
Gorilla gorilla ENSGGOG00000003091 ortholog_one2one 1 retrogene
retro_ggor_2084,
Macropus eugenii ENSMEUG00000005935 ortholog_one2one 4 retrogenes
retro_meug_1825, retro_meug_2097, retro_meug_783, retro_meug_929,
Mus musculus ENSMUSG00000025439 ortholog_one2one 1 retrogene
retro_mmus_1984,
Nomascus leucogenys ENSNLEG00000016699 ortholog_one2one 2 retrogenes
retro_nleu_300, retro_nleu_756,
Oryctolagus cuniculus ENSOCUG00000024393 ortholog_one2many 1 retrogene
retro_ocun_1303,
Pongo abelii ENSPPYG00000003712 ortholog_one2one 1 retrogene
retro_pabe_2494,
Sorex araneus ENSSARG00000009460 ortholog_one2one 2 retrogenes
retro_sara_247, retro_sara_682,
Ictidomys tridecemlineatus ENSSTOG00000027980 ortholog_one2one 3 retrogenes
retro_itri_239, retro_itri_319, retro_itri_490,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_3010 83.26 100.00
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2. retro_hsap_3595 81.34 87.34
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Download FASTA sequences of all ENSG00000074201 retrocopies