Parental gene:

DRG1, ENSCJAG00000011009

Aliases:None
Description:None
Organism:Marmoset (Callithrix jacchus)
Coordinates:1:194211781..194242228(+)


>ENSCJAG00000011009
ATGAGCAGCACCTTAGCTAAGATCGCGGAGATAGAAGCTGAGATGGCTCGGACTCAAAAGAACAAGGCCACAGCACACCA
CCTAGGGCTGCTTAAGGCTCGTCTTGCTAAGCTTCGTCGAGAACTCATTACTCCAAAGGGTGGTGGTGGTGGAGGTCCAG
GAGAAGGTTTTGATGTGGCCAAGACAGGTGATGCTCGAATTGGATTTGTTGGTTTTCCATCTGTGGGGAAGTCAACATTG
CTTAGTAACCTGGCAGGGGTGTATTCTGAGGTAGCAGCCTATGAATTCACTACTCTGACCACTGTGCCTGGTGTCATCAG
ATACAAAGGTGCCAAGATCCAGCTCCTGGATCTCCCAGGTATCATTGAAGGTGCCAAGGATGGGAAAGGTAGAGGTCGTC
AAGTCATTGCAGTGGCCCGAACCTGTAACTTGATCCTGATTGTTTTGGATGTCCTGAAACCCTTGGGACATAAGAAGATA
ATTGAAAATGAACTGGAAGGCTTTGGCATTCGCTTGAACAGCAAACCCCCCAACATTGGCTTTAAGAAGAAGGACAAGGG
AGGCATTAATCTCACAGCTACTTGCCCCCAGAGTGAGCTGGATGCTGAAACTGTGAAAAGCATTCTGGCCGAATACAAGA
TTCATAATGCTGATGTGACTCTACGTAGTGATGCTACAGCTGATGACCTCATTGATGTGGTGGAAGGAAACAGAGTTTAT
ATCCCCTGTATCTATGTGTTAAATAAGATTGACCAAATCTCCATTGAGGAATTGGATATCATCTATAAGGTGCCTCACTG
TGTACCCATCTCTGCCCATCACCGTTGGAATTTTGATGACCTATTGGAAAAGATCTGGGACTATCTGAAACTAGTGAGAA
TTTACACCAAACCCAAAGGCCAGTTACCAGATTACACATCCCCAGTGGTGCTTCCTTACTCCAGGACCACAGTGGAGGAT
TTCTGCATGAAGATTCACAAAAATCTTATCAAAGAATTTAAATATGCTCTGGTCTGGGGTCTCTCTGTGAAACACAATCC
TCAGAAAGTGGGTAAAGACCATACGTTGGAGGATGAGGATGTCATTCAAATTGTGAAGAAGTGA

Library Parental gene expression (RPM)
SRP051959_colon 12 .89 RPM
SRP051959_heart 12 .47 RPM
SRP051959_kidney 15 .18 RPM
SRP051959_liver 12 .93 RPM
SRP051959_lung 12 .97 RPM
SRP051959_lymph_node 14 .47 RPM
SRP051959_skeletal_muscle 17 .67 RPM
SRP051959_spleen 15 .90 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000007040 ortholog_one2many 1 retrogene
retro_amel_1448,
Canis familiaris ENSCAFG00000032601 ortholog_one2many 6 retrogenes
retro_cfam_1535, retro_cfam_1807, retro_cfam_382, retro_cfam_415, retro_cfam_453, retro_cfam_607,
Ciona intestinalis ENSCING00000003305 ortholog_one2many 1 retrogene
retro_cint_1,
Cavia porcellus ENSCPOG00000010791 ortholog_one2many 1 retrogene
retro_cpor_1401,
Ciona savignyi ENSCSAVG00000006503 ortholog_one2many 1 retrogene
retro_csav_10,
Dasypus novemcinctus ENSDNOG00000001312 ortholog_one2many 1 retrogene
retro_dnov_531,
Homo sapiens ENSG00000185721 ortholog_one2many 1 retrogene
retro_hsap_2231,
Gorilla gorilla ENSGGOG00000011185 ortholog_one2many 1 retrogene
retro_ggor_1665,
Myotis lucifugus ENSMLUG00000007033 ortholog_one2many 1 retrogene
retro_mluc_1447,
Macaca mulatta ENSMMUG00000019099 ortholog_one2many 1 retrogene
retro_mmul_999,
Mustela putorius furo ENSMPUG00000012810 ortholog_one2many 1 retrogene
retro_mputfur_339,
Mus musculus ENSMUSG00000020457 ortholog_one2many 1 retrogene
retro_mmus_2366,
Nomascus leucogenys ENSNLEG00000027001 ortholog_one2many 1 retrogene
retro_nleu_2627,
Pan troglodytes ENSPTRG00000014272 ortholog_one2many 1 retrogene
retro_ptro_1578,
Ictidomys tridecemlineatus ENSSTOG00000014187 ortholog_one2many 1 retrogene
retro_itri_460,
Tarsius syrichta ENSTSYG00000010160 ortholog_one2many 3 retrogenes
retro_tsyr_1374, retro_tsyr_1918, retro_tsyr_405,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_855 97.02 100.00
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2. retro_cjac_1104 90.83 65.40
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3. retro_cjac_2246 95.98 67.85
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4. retro_cjac_2606 93.46 100.00
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Download FASTA sequences of all ENSCJAG00000011009 retrocopies