Parental gene: | HSPD1, ENSCHOG00000007401 |
| Aliases: | None |
| Description: | heat shock 60kDa protein 1 (chaperonin) [Source:HGNC Symbol;Acc:5261] |
| Organism: | Sloth (Choloepus hoffmanni) |
| Coordinates: | GeneScaffold_4274:2703..14904(-) |
>ENSCHOG00000007401
ATGCTTCGATTACCCGCAGTCCTTCGGCAGATGAGGCCAGTGTCCAGGGCATTGGCACCTCATCTCACTCGGGCTTATGC
CAAAGATGTAAAATTCGGTGCAGATGCCCGAGCCTTAATGCTTCAAGGTGTAGACCTCTTAGCCGATGCTGTAGCCGTTA
CTATGGGGCCAAAGGGAAGAACAGTGATTATTGAACAGAGTTGGGGAAGTCCCAAAGTAACAAAAGATGGCGTGACTGTT
GCAAAATCAATTGACTTGAAGGATAAATATAAGAATATTGGCGCTAAACTTGTTCAAGATGTTGCCAATAACACAAATGA
AGAGGCTGGGGATGGTACCACCACTGCTACTGTACTGGCACGCTCTATTGCCAAGGAAGGGTTTGAGAAGATTAGCAAAG
GTGCTAATCCAGTGGAAATCAGGAGAGGTGTGATGTTAGCTGTTGATGCTGTAATTGCTGAACTTAAGAAACAGTCGAAA
CCTGTGACAACCCCTGAAGAAATTGCTCAGGTTGCTACAATTTCTGCAAACGGAGATAAAGAAATTGGCAACATCATATC
TGATGCAATGAAAAAGGTTGGAAGAAAGGGTGTCATCACAGTAAAGGATGGAAAAACATTGAATGATGAATTAGAAATTA
TTGAAGGCATGAAGTTTGATCGGGGTTATATTTCTCCATATTTTATTAATACATCAAAAGGTCAGAAATGTGAATTCCAG
GATGCCTATGTTCTGTTGAGTGAAAAGAAAATTTCTAGCGTCCAATCCATTGTACCTGCTCTTGAAATTGCCAATGCTCA
CCGAAAGCCCTTGGTGATAATTGCTGAAGATGTTGATGGAGAAGCTCTAAGTACACTTGTTTTGAATAGGCTGAAAGTTG
GTCTTCAGGTTGTAGCAGTCAAAGCTCCAGGTTTTGGTGACAATAGAAAGAACCAGCTTAAAGACATGGCTATTGCTACT
GGTGGGGCAGTGTTTGGAGAAGAAGGGTTGACTCTAAACCTTGAAGATGTTCAGTCTCATGATTTGGGAAAAGTTGGAGA
GGTCATAGTGACCAAAGATGATGCCATGCTCTTGAAAGGAAAAGGTGACAAGACTCAAATTGAAAAACGTATTCAAGAAA
TCATTGAGCAGTTAGATGTCACAACTAGTGAATATGAAAAGGAAAAACTAAATGAACGTCTAGCAAAACTTTCAGATGGA
GTAGCTGTGCTGAAGGTTGGTGGAACAAGTGATGTGGAAGTGAATGAAAAGAAAGACAGAGTTACAGATGCACTCAATGC
TACACGAGCTGCTGAAGAAGGCATTGTTCTTGGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAAGCTGCAATGGGTAGAATGGATGGAAT
GGGTAGAATGGGTGGTATGGGAGGTGGCATGTTCTAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000013770 | possible_ortholog | 1 retrogene | |
| Canis familiaris | ENSCAFG00000010865 | possible_ortholog | 4 retrogenes | |
| Callithrix jacchus | ENSCJAG00000003990 | possible_ortholog | 6 retrogenes | |
| Echinops telfairi | ENSETEG00000009184 | possible_ortholog | 4 retrogenes | |
| Loxodonta africana | ENSLAFG00000000053 | possible_ortholog | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000011987 | ortholog_one2one | 2 retrogenes | |
| Myotis lucifugus | ENSMLUG00000000871 | ortholog_one2many | 4 retrogenes | |
| Macaca mulatta | ENSMMUG00000010489 | possible_ortholog | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000012289 | ortholog_one2one | 3 retrogenes | |
| Mustela putorius furo | ENSMPUG00000007818 | possible_ortholog | 3 retrogenes | |
| Otolemur garnettii | ENSOGAG00000034053 | possible_ortholog | 5 retrogenes | |
| Pteropus vampyrus | ENSPVAG00000008306 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000014525 | possible_ortholog | 9 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000028470 | ortholog_one2one | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000000513 | ortholog_one2one | 6 retrogenes | |
| Xenopus tropicalis | ENSXETG00000007509 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_chof_1105 | 80.56 | 80.69 | Please wait, loading  |
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| 2. | retro_chof_1300 | 88.97 | 50.58 | Please wait, loading |
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| 3. | retro_chof_1822 | 99.18 | 69.88 | Please wait, loading |
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| 4. | retro_chof_2000 | 93.73 | 73.55 | Please wait, loading |
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| 5. | retro_chof_2397 | 92.02 | 50.19 | Please wait, loading |
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Download FASTA sequences of all ENSCHOG00000007401 retrocopies