Parental gene:

NPM3, ENSCAFG00000009919

Aliases:None
Description:nucleophosmin/nucleoplasmin 3 [Source:HGNC Symbol;Acc:7931]
Organism:Dog (Canis familiaris)
Coordinates:28:14373390..14375660(-)


>ENSCAFG00000009919
ATGGGCGGGGCCGGAACCCGCCGCGAGCTCCCCGCTCTGTACGTGTCGGGGGCGGAGCTCCCAGACGGCCCTTGCAGCAT
GGCCGCCGGCGCCGCGGCCGCTTTGGCGTTCCTGAGTCAGGAGAGCCGAGTCCGGGCCGGGGGAGTCGGGGGTCTGCGGG
TCCCGGCTCCGGTCACTATGGACAGTTTTTTCTTCGGCTGTGAGCTCTCCGGCCACACCCGCTCTTTCACCTTCAAGGTA
GAGGAAGAGGATGATGCGGAGCATGTGCTGGCCTTGACCATGCTCTGCCTCACCGAGGGGGCCAAAGATGAGTGTAACGT
AGTAGAAGTCGTGGCCAGGAATCACGACCACCAGGAGATTGCGGTCCCTGTGGCCAACCTCAAGTTGTCCTGCCAACCCA
TGCTCAGTTTGGATGACTTCCAGCTCCAGCCACCTGTCACCTTCCGCCTGAAGTCAGGTTCTGGTCCTGTGCGGATCACT
GGGAGGCACCAGATTGTTACTATAAGTAATGACGTTTCTGAGGAAGAAGAGAGTGAAGAAGAAGGTAGTGAGGAGGAAGC
TGAGTTGTGCCCCATCCTGCCTGCCAAGAAGCAGGGGGGTAGGCTCTAG

Library Parental gene expression (RPM)
SRP012049_cerebellum 15 .79 RPM
SRP017611_brain 6 .27 RPM
SRP017611_kidney 41 .87 RPM
SRP017611_liver 14 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000017639 ortholog_one2one 2 retrogenes
retro_amel_1233, retro_amel_90,
Bos taurus ENSBTAG00000016335 ortholog_one2one 1 retrogene
retro_btau_1164,
Canis familiaris ENSCAFG00000016912 within_species_paralog 3 retrogenes
retro_cfam_22, retro_cfam_286, retro_cfam_900,
Callithrix jacchus ENSCJAG00000017650 ortholog_one2one 2 retrogenes
retro_cjac_2491, retro_cjac_3052,
Cavia porcellus ENSCPOG00000006301 ortholog_one2one 1 retrogene
retro_cpor_1315,
Dasypus novemcinctus ENSDNOG00000018876 ortholog_one2one 1 retrogene
retro_dnov_1279,
Dipodomys ordii ENSDORG00000003491 ortholog_one2one 1 retrogene
retro_dord_577,
Felis catus ENSFCAG00000007178 ortholog_one2one 1 retrogene
retro_fcat_1906,
Homo sapiens ENSG00000107833 ortholog_one2one 1 retrogene
retro_hsap_792,
Macropus eugenii ENSMEUG00000003465 ortholog_one2many 2 retrogenes
retro_meug_20, retro_meug_25,
Microcebus murinus ENSMICG00000011739 ortholog_one2one 1 retrogene
retro_mmur_126,
Myotis lucifugus ENSMLUG00000004961 ortholog_one2one 1 retrogene
retro_mluc_2333,
Macaca mulatta ENSMMUG00000015774 ortholog_one2one 1 retrogene
retro_mmul_1072,
Mus musculus ENSMUSG00000056209 ortholog_one2one 2 retrogenes
retro_mmus_2756, retro_mmus_3479,
Ochotona princeps ENSOPRG00000009229 ortholog_one2one 2 retrogenes
retro_opri_1019, retro_opri_92,
Pongo abelii ENSPPYG00000002589 ortholog_one2one 1 retrogene
retro_pabe_706,
Pan troglodytes ENSPTRG00000002875 ortholog_one2one 1 retrogene
retro_ptro_551,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_1968 64.71 66.83
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_cfam_2064 79.13 56.93
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSCAFG00000009919 retrocopies