Parental gene:

ENSCAFG00000009692

Aliases:None
Description:None
Organism:Dog (Canis familiaris)
Coordinates:35:10454385..10461855(+)


>ENSCAFG00000009692
ATGCAGAAGGACTCTGGCCCACTAGTGCCTATACACTGGATTGGCTTTGGTTATGCGGCGCTGGTTGCTTCTGGTGGGAT
CATTGGCTATGCGAAAGCAGGTAGTGTCCCATCACTGGCTGCTGGGCTGTTTTTTGGTAGTTTAGCAGGCCTGGGTGCTT
ATCAGCTGTCTCAAGATCCGAGGAACATTTGGGTTTTCCTAGCTACCTCTGGAACCCTGGCTGGCATTATGGGAATGAGG
TTCTACCACTCTGGAAAATTTATGCCTGCGGGCTTAATCGCAGGTGCCAGTTTGCTGATGGTCGCCAAACTTGGAATTAG
TGTGTTGAATAAACCCCATCAGTAG

Library Parental gene expression (RPM)
SRP012049_cerebellum 28 .94 RPM
SRP017611_brain 22 .07 RPM
SRP017611_kidney 93 .05 RPM
SRP017611_liver 25 .67 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000002614 ortholog_one2one 3 retrogenes
retro_amel_1256, retro_amel_939, retro_amel_957,
Bos taurus ENSBTAG00000005808 ortholog_one2many 1 retrogene
retro_btau_970,
Callithrix jacchus ENSCJAG00000004957 ortholog_many2many 1 retrogene
retro_cjac_725,
Dasypus novemcinctus ENSDNOG00000007732 ortholog_many2many 6 retrogenes
retro_dnov_1220, retro_dnov_1547, retro_dnov_1968, retro_dnov_289, retro_dnov_316, retro_dnov_367,
Equus caballus ENSECAG00000026994 ortholog_one2many 1 retrogene
retro_ecab_659,
Erinaceus europaeus ENSEEUG00000009000 ortholog_one2many 1 retrogene
retro_eeur_26,
Felis catus ENSFCAG00000014178 ortholog_many2many 5 retrogenes
retro_fcat_301, retro_fcat_314, retro_fcat_367, retro_fcat_93, retro_fcat_983,
Homo sapiens ENSG00000111843 ortholog_many2many 2 retrogenes
retro_hsap_1793, retro_hsap_2481,
Homo sapiens ENSG00000137210 ortholog_many2many 1 retrogene
retro_hsap_684,
Gorilla gorilla ENSGGOG00000009702 ortholog_many2many 1 retrogene
retro_ggor_4,
Loxodonta africana ENSLAFG00000009795 ortholog_one2many 2 retrogenes
retro_lafr_1233, retro_lafr_1246,
Macropus eugenii ENSMEUG00000000210 ortholog_one2many 1 retrogene
retro_meug_1704,
Macaca mulatta ENSMMUG00000018788 ortholog_many2many 2 retrogenes
retro_mmul_1244, retro_mmul_1597,
Mustela putorius furo ENSMPUG00000000613 ortholog_one2one 2 retrogenes
retro_mputfur_1322, retro_mputfur_226,
Mus musculus ENSMUSG00000021361 ortholog_one2many 2 retrogenes
retro_mmus_1634, retro_mmus_2355,
Nomascus leucogenys ENSNLEG00000000564 ortholog_one2many 3 retrogenes
retro_nleu_269, retro_nleu_2933, retro_nleu_607,
Oryctolagus cuniculus ENSOCUG00000016368 ortholog_one2many 3 retrogenes
retro_ocun_1129, retro_ocun_1348, retro_ocun_284,
Otolemur garnettii ENSOGAG00000012165 ortholog_one2many 3 retrogenes
retro_ogar_1155, retro_ogar_2425, retro_ogar_3462,
Ochotona princeps ENSOPRG00000014366 ortholog_one2many 4 retrogenes
retro_opri_192, retro_opri_29, retro_opri_409, retro_opri_898,
Pongo abelii ENSPPYG00000016225 ortholog_one2many 1 retrogene
retro_pabe_1473,
Pan troglodytes ENSPTRG00000017720 ortholog_many2many 2 retrogenes
retro_ptro_1199, retro_ptro_1435,
Rattus norvegicus ENSRNOG00000015437 ortholog_many2many 2 retrogenes
retro_rnor_1595, retro_rnor_33,
Sarcophilus harrisii ENSSHAG00000011456 ortholog_one2many 1 retrogene
retro_shar_177,
Sus scrofa ENSSSCG00000001038 ortholog_one2many 3 retrogenes
retro_sscr_438, retro_sscr_449, retro_sscr_614,
Ictidomys tridecemlineatus ENSSTOG00000022833 ortholog_one2many 1 retrogene
retro_itri_47,
Tursiops truncatus ENSTTRG00000003666 ortholog_one2many 2 retrogenes
retro_ttru_1504, retro_ttru_258,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_115 75.51 85.96
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_cfam_1716 74.63 57.89
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSCAFG00000009692 retrocopies