Parental gene:

FAM60A, ENSBTAG00000001161

Aliases:None
Description:protein FAM60A [Source:RefSeq peptide;Acc:NP_001069584]
Organism:Cow (Bos taurus)
Coordinates:5:79034367..79064677(+)


>ENSBTAG00000001161
ATGTTTGGTTTTCACAAGCCAAAGATGTACCGAAGTATAGAGGGCTGCTGTATTTGCAGAGCTAAATCCTCCAGTTCTCG
ATTCACTGACAGTAAACGCTATGAAAAGGATTTCCAGAGCTGTTTTGGGTTACATGAGACTCGTTCAGGAGATATCTGTA
ATGCCTGTGTCCTGCTTGTGAAAAGATGGAAGAAATTGCCAGCAGGATCAAAAAAAAACTGGAATCATGTGGTAGATGCA
AGGGCAGGACCCAGTCTAAAGACTACACTGAAACCAAAGAAAGTGAAAACTCTATCTGGAAACAGGATAAAAAGTAACCA
GATCAGTAAACTGCAGAAGGAATTTAAGCGCCACAATTCTGATGCTCACAGTACAACCTCAAGTGCCTCTCCAGCTCAGT
CTCCCTGTTACAGTAACCAGTCAGATGATGGCTCAGATACAGAGATGGCTTCTGGCTCCAACAGAACGCCAGTGTTTTCC
TTTTTAGATCTCACATACTGGAAAAGACAGAAAATATGCTGTGGCATTATCTATAAAGGCCGTTTTGGGGAAGTCCTCAT
CGACACACATCTATTCAAGCCTTGCTGCAGCAATAAGAAAGCAGCTGCTGAGAAGCCAGAGGAGCAGGGGCCAGAGCCTC
TGCCTATCTCCACTCAGGAGTGGTGA

Library Parental gene expression (RPM)
ERP005899_liver 4 .40 RPM
ERP005899_muscle 19 .32 RPM
SRP017611_brain 1 .55 RPM
SRP017611_kidney 19 .50 RPM
SRP017611_liver 1 .96 RPM
SRP030211_testis 8 .88 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000010685 ortholog_one2one 4 retrogenes
retro_cfam_1120, retro_cfam_1552, retro_cfam_1692, retro_cfam_1837,
Choloepus hoffmanni ENSCHOG00000007193 ortholog_one2one 17 retrogenes
retro_chof_109, retro_chof_1108, retro_chof_1136, retro_chof_1255, retro_chof_1614, retro_chof_1689, retro_chof_1770, retro_chof_1971, retro_chof_2126, retro_chof_2493, retro_chof_2576, retro_chof_2587, retro_chof_453, retro_chof_511, retro_chof_856, retro_chof_979, retro_chof_998,
Callithrix jacchus ENSCJAG00000001215 ortholog_one2many 3 retrogenes
retro_cjac_1072, retro_cjac_3154, retro_cjac_3289,
Felis catus ENSFCAG00000008955 ortholog_one2one 4 retrogenes
retro_fcat_1311, retro_fcat_1339, retro_fcat_58, retro_fcat_965,
Homo sapiens ENSG00000139146 ortholog_one2one 3 retrogenes
retro_hsap_1928, retro_hsap_1945, retro_hsap_4029,
Gorilla gorilla ENSGGOG00000015484 ortholog_one2one 3 retrogenes
retro_ggor_1405, retro_ggor_1415, retro_ggor_2704,
Myotis lucifugus ENSMLUG00000009827 ortholog_one2one 3 retrogenes
retro_mluc_1663, retro_mluc_1672, retro_mluc_765,
Macaca mulatta ENSMMUG00000009155 ortholog_one2one 2 retrogenes
retro_mmul_1074, retro_mmul_2324,
Nomascus leucogenys ENSNLEG00000016487 ortholog_one2one 1 retrogene
retro_nleu_1213,
Otolemur garnettii ENSOGAG00000008927 ortholog_one2one 4 retrogenes
retro_ogar_1253, retro_ogar_1762, retro_ogar_2117, retro_ogar_251,
Pongo abelii ENSPPYG00000004396 ortholog_one2one 2 retrogenes
retro_pabe_1592, retro_pabe_3309,
Rattus norvegicus ENSRNOG00000046048 possible_ortholog 1 retrogene
retro_rnor_2858,
Rattus norvegicus ENSRNOG00000049943 possible_ortholog 2 retrogenes
retro_rnor_1121, retro_rnor_2917,
Sarcophilus harrisii ENSSHAG00000006261 ortholog_one2one 1 retrogene
retro_shar_670,
Ictidomys tridecemlineatus ENSSTOG00000007097 ortholog_one2many 1 retrogene
retro_itri_16,
Tursiops truncatus ENSTTRG00000008465 ortholog_one2one 3 retrogenes
retro_ttru_1162, retro_ttru_1498, retro_ttru_984,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_1020 97.29 100.00
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Download FASTA sequences of all ENSBTAG00000001161 retrocopies