Parental gene: | ACTA2, ENSTSYG00000008155 |
| Aliases: | None |
| Description: | actin, alpha 2, smooth muscle, aorta [Source:HGNC Symbol;Acc:130] |
| Organism: | Tarsier (Tarsius syrichta) |
| Coordinates: | GeneScaffold_3955:43848..58372(-) |
>ENSTSYG00000008155
ATGTGTGAAGAAGAAGACAGCACCGCCTTGGTGTGTGACAACGGCTCTGGGCTCTGTAAGGCCGGCTTTGCGGGGGACGA
TGCTCCCAGGGCCGTTTTTCCATCCATTGTGGGACGTCCCCGACATCAGGGGGTGATGGTGGGAATGGGACAAAAAGACA
GCTACGTGGGTGATGAAGCACAGAGTAAAAGAGGAATCCTGACCTTGAAGTACCCAATAGAACACGGCATCATCACCAAC
TGGGACGACATGGAAAAGATCTGGCATCACTCTTTGTACAACGAGCTTCGTGTCGCCCCTGAGGAGCATCCAACCTTGCT
CACGGAGGCACCCCTGAACCCCAAGGCCAACCGGGAGAAAATGACCCAGATCATGTTTGAGACTTTCAATGTCCCAGCCA
TGTATGTGGCCATCCAGGCGGTGCTGTCGCTCTACGCCTCTGGTCGCACAACTGGCATTGTTCTGGACTCTGGAGATGGT
GTCACCCACAATGTGCCCATCTATGAGGGCTACGCCCTGCCCCACGCCATCATGCGTCTGGACCTGGCTGGCCGAGATCT
CACCGACTACCTCATGAAGATCCTGACTGAGCGTGGCTATTCCTTCGTGACTACCGCTGAGCGTGAGATCGTCCGGGACA
TCAAGGAGAAACTGTGCTACGTGGCTCTGGACTTCGAAAATGAGATGGCCACCGCCGCATCCTCCTCCTCTCTTGAGAAG
AGCTACGAGCTTCCTGATGGGCAGGTGATCACCATCGGAAATGAACGCTTCCGTTGCCCAGAGACCCTATTCCAGCCATC
TTTCATCGGGATGGAGTCTGCTGGCATCCATGAAACCACCTACAACAGCATCATGAAGTGTGATATTGACATCAGGAAGG
ACCTCTATGCTAACAACGTCCTCTCCGGGGGCACCACCATGTACCCTGGCATTGCCGACAGGATGCAGAAGGAGATCACG
GCCCTCGCGCCCAGCACTATGAAGATCAAGATCATTGCCCCTCCAGAGCGCAAATACTCCGTCTGGATCGGAGGCTCCAT
CCTGGCCTCCCTGTCCACCTTCCAGCAGATGTGGATCAGCAAGCAGGAGTATGACGAAGCGGGCCCCTCCATCGTCCATC
GCAAATGCTTCTAA
ATGTGTGAAGAAGAAGACAGCACCGCCTTGGTGTGTGACAACGGCTCTGGGCTCTGTAAGGCCGGCTTTGCGGGGGACGA
TGCTCCCAGGGCCGTTTTTCCATCCATTGTGGGACGTCCCCGACATCAGGGGGTGATGGTGGGAATGGGACAAAAAGACA
GCTACGTGGGTGATGAAGCACAGAGTAAAAGAGGAATCCTGACCTTGAAGTACCCAATAGAACACGGCATCATCACCAAC
TGGGACGACATGGAAAAGATCTGGCATCACTCTTTGTACAACGAGCTTCGTGTCGCCCCTGAGGAGCATCCAACCTTGCT
CACGGAGGCACCCCTGAACCCCAAGGCCAACCGGGAGAAAATGACCCAGATCATGTTTGAGACTTTCAATGTCCCAGCCA
TGTATGTGGCCATCCAGGCGGTGCTGTCGCTCTACGCCTCTGGTCGCACAACTGGCATTGTTCTGGACTCTGGAGATGGT
GTCACCCACAATGTGCCCATCTATGAGGGCTACGCCCTGCCCCACGCCATCATGCGTCTGGACCTGGCTGGCCGAGATCT
CACCGACTACCTCATGAAGATCCTGACTGAGCGTGGCTATTCCTTCGTGACTACCGCTGAGCGTGAGATCGTCCGGGACA
TCAAGGAGAAACTGTGCTACGTGGCTCTGGACTTCGAAAATGAGATGGCCACCGCCGCATCCTCCTCCTCTCTTGAGAAG
AGCTACGAGCTTCCTGATGGGCAGGTGATCACCATCGGAAATGAACGCTTCCGTTGCCCAGAGACCCTATTCCAGCCATC
TTTCATCGGGATGGAGTCTGCTGGCATCCATGAAACCACCTACAACAGCATCATGAAGTGTGATATTGACATCAGGAAGG
ACCTCTATGCTAACAACGTCCTCTCCGGGGGCACCACCATGTACCCTGGCATTGCCGACAGGATGCAGAAGGAGATCACG
GCCCTCGCGCCCAGCACTATGAAGATCAAGATCATTGCCCCTCCAGAGCGCAAATACTCCGTCTGGATCGGAGGCTCCAT
CCTGGCCTCCCTGTCCACCTTCCAGCAGATGTGGATCAGCAAGCAGGAGTATGACGAAGCGGGCCCCTCCATCGTCCATC
GCAAATGCTTCTAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000000759 | ortholog_one2one | 3 retrogenes | |
| Dasypus novemcinctus | ENSDNOG00000006719 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000008526 | possible_ortholog | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000010843 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000015509 | ortholog_one2one | 3 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000012233 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000008193 | ortholog_one2one | 3 retrogenes | |
| Pongo abelii | ENSPPYG00000002459 | ortholog_one2one | 1 retrogene | |
| Sorex araneus | ENSSARG00000005778 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000017616 | ortholog_one2one | 3 retrogenes | |
| Tarsius syrichta | ENSTSYG00000000406 | other_paralog | 1 retrogene | |
| Vicugna pacos | ENSVPAG00000010621 | possible_ortholog | 3 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_tsyr_9 | 88.24 | 99.20 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_tsyr_92 | 93.67 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_tsyr_858 | 89.87 | 99.20 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_tsyr_1282 | 89.45 | 52.79 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_tsyr_2102 | 79.37 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSTSYG00000008155 retrocopies