Parental gene: | ENSVPAG00000010621 |
| Aliases: | None |
| Description: | None |
| Organism: | Alpaca (Vicugna pacos) |
| Coordinates: | GeneScaffold_2229:105531..108687(-) |
>ENSVPAG00000010621
GGAGTCATGGTGGGCATGGGTCAGAAGGATTCCTATGTAGGTGATGAGGCCCAGAGCAAGCGAGGTATCCTGACTCTCAA
ATACCCCATCGAGCACGGCATCATCACCAACTGGGACGACATGGAGAAGATCTGGCACCACACCTTCTACAACGAGCTCC
GTGTGGCCCCGGAGGAGCACCCCACTCTGCTCACTGAGGCCCCGCTGAACCCCAAGGCCAACCGGGAGAAGATGACCCAG
ATCATGTTTGAGACCTTCAACGTCCCCGCCATGTATGTGGCCATCCAGGCAGTGCTGTCCCTGTACGCTTCCGGCCGTAC
CACAGGCATTGTTCTGGACTCTGGGGATGGTGTGACCCACAATGTCCCCATCTATGAGGGCTACGCTTTGCCCCATGCCA
TCATGCGTCTGGATCTAGCTGGTCGGGATCTCACTGACTACCTCATGAAGATCCTCACTGAGCGTGGCTACTCCTTTGTC
ACCACCGCTGAACGTGAAATTGTTCGTGACATTAAAGAGAAGCTGTGCTATGTCGCTCTGGATTTTGAGAATGAGATGGC
TACTGCTGCTTCTTCCTCCTCCCTGGAGAAGAGCTATGAACTGCCTGATGGCCAAGTCATCACTATTGGCAATGAGCGCT
TCCGCTGCCCCGAGACGCTCTTCCAGCCCTCCTTCATTGGTATGGAATCTGCTGGCATCCATGAAACGACTTACAATAGC
ATCATGAAATGTGACATTGATATCCGCAAGGACCTGTATGCCAACAATGTCTTATCTGGAGGTACCACCATGTACCCTGG
TATTGCTGATCGCATGCAAAAGGAAATCACTGCCCTGGCTCCCAGCACCATGAAGATTAAGATTATTGCCCCCCCAGAGC
GTAAGTACTCTGTCTGGATCGGGGGCTCCATCCTGGCCTCCCTGTCTACCTTCCAGCAGATGTGGATCAGCAAGCAAGAG
TATGACGAGGCAGGCCCATCCATCGTCCACCGCAAATGCTTTTAA
GGAGTCATGGTGGGCATGGGTCAGAAGGATTCCTATGTAGGTGATGAGGCCCAGAGCAAGCGAGGTATCCTGACTCTCAA
ATACCCCATCGAGCACGGCATCATCACCAACTGGGACGACATGGAGAAGATCTGGCACCACACCTTCTACAACGAGCTCC
GTGTGGCCCCGGAGGAGCACCCCACTCTGCTCACTGAGGCCCCGCTGAACCCCAAGGCCAACCGGGAGAAGATGACCCAG
ATCATGTTTGAGACCTTCAACGTCCCCGCCATGTATGTGGCCATCCAGGCAGTGCTGTCCCTGTACGCTTCCGGCCGTAC
CACAGGCATTGTTCTGGACTCTGGGGATGGTGTGACCCACAATGTCCCCATCTATGAGGGCTACGCTTTGCCCCATGCCA
TCATGCGTCTGGATCTAGCTGGTCGGGATCTCACTGACTACCTCATGAAGATCCTCACTGAGCGTGGCTACTCCTTTGTC
ACCACCGCTGAACGTGAAATTGTTCGTGACATTAAAGAGAAGCTGTGCTATGTCGCTCTGGATTTTGAGAATGAGATGGC
TACTGCTGCTTCTTCCTCCTCCCTGGAGAAGAGCTATGAACTGCCTGATGGCCAAGTCATCACTATTGGCAATGAGCGCT
TCCGCTGCCCCGAGACGCTCTTCCAGCCCTCCTTCATTGGTATGGAATCTGCTGGCATCCATGAAACGACTTACAATAGC
ATCATGAAATGTGACATTGATATCCGCAAGGACCTGTATGCCAACAATGTCTTATCTGGAGGTACCACCATGTACCCTGG
TATTGCTGATCGCATGCAAAAGGAAATCACTGCCCTGGCTCCCAGCACCATGAAGATTAAGATTATTGCCCCCCCAGAGC
GTAAGTACTCTGTCTGGATCGGGGGCTCCATCCTGGCCTCCCTGTCTACCTTCCAGCAGATGTGGATCAGCAAGCAAGAG
TATGACGAGGCAGGCCCATCCATCGTCCACCGCAAATGCTTTTAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000000759 | possible_ortholog | 3 retrogenes | |
| Dasypus novemcinctus | ENSDNOG00000006719 | possible_ortholog | 1 retrogene | |
| Echinops telfairi | ENSETEG00000008526 | ortholog_one2one | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000005463 | possible_ortholog | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000010843 | possible_ortholog | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000015509 | possible_ortholog | 3 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000012233 | possible_ortholog | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000008193 | possible_ortholog | 3 retrogenes | |
| Pongo abelii | ENSPPYG00000002459 | possible_ortholog | 1 retrogene | |
| Sorex araneus | ENSSARG00000005778 | possible_ortholog | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000017616 | possible_ortholog | 3 retrogenes | |
| Tarsius syrichta | ENSTSYG00000008155 | possible_ortholog | 5 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_vpac_12 | 87.43 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_vpac_355 | 72.55 | 90.12 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_vpac_651 | 56.71 | 64.97 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSVPAG00000010621 retrocopies