Parental gene: | ACTA2, ENSTBEG00000017616 |
| Aliases: | None |
| Description: | actin, alpha 2, smooth muscle, aorta [Source:HGNC Symbol;Acc:130] |
| Organism: | Treeshrew (Tupaia belangeri) |
| Coordinates: | GeneScaffold_2646:114897..128821(-) |
>ENSTBEG00000017616
ATGTGTGAAGAAGAGGACAGCACTGCCCTGGTGTGTGACAATGGCTCTGGGCTCTGCAAGGCTGGTTTTGCTGGGGACGA
TGCTCCCAGGGCTGTTTTCCCATCCATTGTGGGACGTCCCAGACACCAGGGGGTGATGGTGGGAATGGGACAAAAAGACA
GCTACGTGGGTGATGAAGCACAGAGCAAAAGAGGAATCCTGACCTTGAAGTACCCAATAGAACACGGCATCATCACCAAC
TGGGATGACATGGAAAAGATTTGGCATCATTCTTTCTACAATGAGCTCCGCGTTGCCCCTGAAGAGCATCCAACCCTGCT
CACAGAGGCACCCCTGAACCCCAAGGCCAACCGGGAGAAAATGACCCAGATCATGTTTGAGACTTTCAACGTCCCCGCCA
TGTATGTGGCTATTCAGGCAGTGCTGTCCCTCTACGCCTCTGGACGTACAACCGGAATCGTGCTGGACTCTGGGGACGGC
GTCACCCACAACGTGCCCATCTATGAGGGCTATGCCCTGCCCCACGCCATCATGCGTCTGGACCTGGCTGGCCGTGATCT
CACCGACTACCTCATGAAGATTCTGACCGAGCGTGGCTATTCCTTTGTGACAACTGCTGAGCGCGAGATTGTCCGGGACA
TCAAGGAGAAGCTGTGCTATGTGGCACTAGACTTTGAAAACGAGATGGCCACAGCCGCGTCCTCCTCCTCCCTGGAGAAG
AGCTACGAGCTGCCTGACGGGCAGGTGATCACCATCGGGAACGAACGCTTCCGCTGCCCAGAGACCCTGTTCCAGCCGTC
CTTCATCGGGATGGAGTCTGCCGGCATCCACGAGACCACCTACAACAGCATCATGAAGTGTGATATTGACATCAGGAAGG
ACCTCTACGCTAACAACGTCCTCTCGGGGGGCACCACCATGTACCCCGGCATTGCCGACCGGATGCAGAAGGAGATTACG
GCTCTAGCACCCAGCACGATGAAGATCAAGATCATCGCGCCTCCCGAGCGCAAGTACTCGGTGTGGATCGGCGGCTCCAT
CCTGGCCTCGCTGTCCACCTTCCAGCAGATGTGGATCAGCAAGCAGGAGTATGACGAGGCTGGGCCCTCCATTGTGCACC
GCAAATGCTTCTAG
ATGTGTGAAGAAGAGGACAGCACTGCCCTGGTGTGTGACAATGGCTCTGGGCTCTGCAAGGCTGGTTTTGCTGGGGACGA
TGCTCCCAGGGCTGTTTTCCCATCCATTGTGGGACGTCCCAGACACCAGGGGGTGATGGTGGGAATGGGACAAAAAGACA
GCTACGTGGGTGATGAAGCACAGAGCAAAAGAGGAATCCTGACCTTGAAGTACCCAATAGAACACGGCATCATCACCAAC
TGGGATGACATGGAAAAGATTTGGCATCATTCTTTCTACAATGAGCTCCGCGTTGCCCCTGAAGAGCATCCAACCCTGCT
CACAGAGGCACCCCTGAACCCCAAGGCCAACCGGGAGAAAATGACCCAGATCATGTTTGAGACTTTCAACGTCCCCGCCA
TGTATGTGGCTATTCAGGCAGTGCTGTCCCTCTACGCCTCTGGACGTACAACCGGAATCGTGCTGGACTCTGGGGACGGC
GTCACCCACAACGTGCCCATCTATGAGGGCTATGCCCTGCCCCACGCCATCATGCGTCTGGACCTGGCTGGCCGTGATCT
CACCGACTACCTCATGAAGATTCTGACCGAGCGTGGCTATTCCTTTGTGACAACTGCTGAGCGCGAGATTGTCCGGGACA
TCAAGGAGAAGCTGTGCTATGTGGCACTAGACTTTGAAAACGAGATGGCCACAGCCGCGTCCTCCTCCTCCCTGGAGAAG
AGCTACGAGCTGCCTGACGGGCAGGTGATCACCATCGGGAACGAACGCTTCCGCTGCCCAGAGACCCTGTTCCAGCCGTC
CTTCATCGGGATGGAGTCTGCCGGCATCCACGAGACCACCTACAACAGCATCATGAAGTGTGATATTGACATCAGGAAGG
ACCTCTACGCTAACAACGTCCTCTCGGGGGGCACCACCATGTACCCCGGCATTGCCGACCGGATGCAGAAGGAGATTACG
GCTCTAGCACCCAGCACGATGAAGATCAAGATCATCGCGCCTCCCGAGCGCAAGTACTCGGTGTGGATCGGCGGCTCCAT
CCTGGCCTCGCTGTCCACCTTCCAGCAGATGTGGATCAGCAAGCAGGAGTATGACGAGGCTGGGCCCTCCATTGTGCACC
GCAAATGCTTCTAG
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000000759 | ortholog_one2one | 3 retrogenes | |
| Dasypus novemcinctus | ENSDNOG00000006719 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000008526 | possible_ortholog | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000010843 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000015509 | ortholog_one2one | 3 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000012233 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000008193 | ortholog_one2one | 3 retrogenes | |
| Pongo abelii | ENSPPYG00000002459 | ortholog_one2one | 1 retrogene | |
| Sorex araneus | ENSSARG00000005778 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000010781 | within_species_paralog | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000008155 | ortholog_one2one | 5 retrogenes | |
| Vicugna pacos | ENSVPAG00000010621 | possible_ortholog | 3 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_tbel_1555 | 76.21 | 82.23 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_tbel_3014 | 88.27 | 99.20 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_tbel_4616 | 70.72 | 79.31 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSTBEG00000017616 retrocopies