Parental gene:

ACTA2, ENSDNOG00000006719

Aliases:None
Description:actin, alpha 2, smooth muscle, aorta [Source:HGNC Symbol;Acc:130]
Organism:Armadillo (Dasypus novemcinctus)
Coordinates:GeneScaffold_7119:195543..206771(-)


>ENSDNOG00000006719
ATGTGTGAAGAAGAGGACAGCACCGCCCTGGTGTGTGACAATGGCTCTGGGCTCTGTAAGGCCGGCTTTGCTGGGGATGA
TGCTCCCAGGGCTGTTTTCCCATCGATTGTGGGCCGTCCCAGGCATCAGGGGGTGATGGTGGGAATGGGTCAAAAAGACA
GCTACGTGGGAGATGAAGCACAAAGCAAAAGAGGAATCCTGACCTTGAAGTACCCGATAGAACATGGCATCATCACCAAC
TGGGACGACATGGAAAAGATCTGGCATCACTCTTTCTACAATGAGCTGCGTGTTGCTCCTGAAGAGCATCCAACCCTTCT
CACTGAGGCTCCCCTGAACCCCAAGGCCAATCGGGAGAAAATGACTCAGATTATGTTTGAGACATTCAATGTTCCAGCCA
TGTATGTGGCTATTCAGGCTGTGCTGTCCCTCTATGCCTCTGGACGTACAACTGGCATTGTGCTGGACTCTGGGGATGGT
GTCACCCACAACGTGCCCATCTATGAGGGCTATGCCCTGCCCCATGCCATCATGCGTCTAGACCTGGCTGGCCGAGATCT
CACGGACTACCTCATGAAGATCCTGACTGAGCGGGGCTATTCCTTCGTGACTACTGCTGAGCGTGAGATTGTCCGGGACA
TCAAGGAGAAACTGTGCTATGTAGCTCTGGACTTTGAAAATGAGATGGCCACTGCTGCGTCTTCCTCCTCCCTTGAGAAG
AGCTACGAGCTGCCTGATGGGCAGGTGATTACCATCGGAAATGAGCGCTTCCGCTGTCCAGAGACTCTGTTCCAGCCATC
TTTCATCGGGATGGAATCTGCTGGCATCCATGAAACCACCTACAACAGCATCATGAAGTGTGATATCGACATCAGGAAGG
ACCTCTATGCTAACAATGTCCTCTCAGGGGGCACCACCATGTACCCTGGCATTGCTGACCGGATGCAGAAGGAGATCACG
GCCCTAGCGCCCAGCACCATGAAGATCAAGATCATCGCCCCTCCGGAGCGCAAGTACTCTGTCTGGATCGGAGGCTCCAT
CCTGGCCTCTCTGTCCACCTTCCAACAGATGTGGATCAGCAAACAGGAGTATGACGAAGCCGGGCCCTCTATTGTCCACC
GCAAATGCTTCTAA

Library Parental gene expression (RPM)
SRP012922_ascending_colon 520 .20 RPM
SRP012922_cerebellum 7 .01 RPM
SRP012922_heart 34 .11 RPM
SRP012922_kidney 124 .85 RPM
SRP012922_liver 30 .50 RPM
SRP012922_lung 418 .77 RPM
SRP012922_quadricep_muscle 101 .08 RPM
SRP012922_spleen 1536 .07 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000000759 ortholog_one2one 3 retrogenes
retro_chof_1909, retro_chof_2042, retro_chof_21,
Echinops telfairi ENSETEG00000008526 possible_ortholog 1 retrogene
retro_etel_41,
Macropus eugenii ENSMEUG00000010843 ortholog_one2one 1 retrogene
retro_meug_1374,
Myotis lucifugus ENSMLUG00000015509 ortholog_one2one 3 retrogenes
retro_mluc_190, retro_mluc_427, retro_mluc_90,
Nomascus leucogenys ENSNLEG00000012233 ortholog_one2one 1 retrogene
retro_nleu_2313,
Oryctolagus cuniculus ENSOCUG00000008193 ortholog_one2one 3 retrogenes
retro_ocun_1306, retro_ocun_1421, retro_ocun_919,
Pongo abelii ENSPPYG00000002459 ortholog_one2one 1 retrogene
retro_pabe_3027,
Sorex araneus ENSSARG00000005778 ortholog_one2one 1 retrogene
retro_sara_732,
Tupaia belangeri ENSTBEG00000017616 ortholog_one2one 3 retrogenes
retro_tbel_1555, retro_tbel_3014, retro_tbel_4616,
Tarsius syrichta ENSTSYG00000008155 ortholog_one2one 5 retrogenes
retro_tsyr_1282, retro_tsyr_2102, retro_tsyr_858, retro_tsyr_9, retro_tsyr_92,
Vicugna pacos ENSVPAG00000010621 possible_ortholog 3 retrogenes
retro_vpac_12, retro_vpac_355, retro_vpac_651,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_dnov_32 93.38 72.15
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSDNOG00000006719 retrocopies