Parental gene: | SMS, ENSTBEG00000012109 |
| Aliases: | None |
| Description: | spermine synthase [Source:HGNC Symbol;Acc:11123] |
| Organism: | Treeshrew (Tupaia belangeri) |
| Coordinates: | GeneScaffold_926:156902..185654(+) |
>ENSTBEG00000012109
TTCGCCAATTTGAGAATTTACCCACATGGATTGGTGTTGCTGGACCTTCAGAGTTACGACAGTGATGTGCAGGGCAAAGA
AGAAATCGACAGCCTTTTGAACAAAGTAGAAGAAAGAATGAAAGAATTGAATCAGGACAATACTGGGCGGGTAAAAAGAT
TACCACCCATCGTTCGAGGAGGGGCCATTGACAGATACTGGCCCACCGCCGATGGGCGCCTGGTCGAGTATGACATAGAT
GAAGTGGTGTATGATGAAGATTCACCTTATCAGAACATTAAAATTTTACACTCGAAGCAATTTGGAAATATTCTCATTCT
GAGCGGGGATGTTAATTTGGCAGAGAGCGATTTGGCATATACCCGGGCCATCATGGGCAGCGGCAAAGAAGATTACACTG
GCAAGGATGTACTGATTCTGGGAGGTGGAGACGGCGGCATATTATGTGAAATAGTCAAATTGAAACCAAAGATGGTCACT
ATGGTAGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAACGTGTGGTGACGTCTTAGACCTTAA
GGGAGACTGCTATCAGGTTCTTATCGAAGACTGTATTCCAGTACTGAAGAGGTACGCCAAAGAAGGGAGAGAGTTTGATT
ATGTGATTAATGATTTGACAGCTGTTCCAATCTCCACCTCTCCAGAAGAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGAACTGTGTCAACTTGGGAGCCCTGTC
GCTCTATGAAGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNGTGGGTATTTTACACTGTTTGGAAGAAAGCTAAGCCTTGA
TTCGCCAATTTGAGAATTTACCCACATGGATTGGTGTTGCTGGACCTTCAGAGTTACGACAGTGATGTGCAGGGCAAAGA
AGAAATCGACAGCCTTTTGAACAAAGTAGAAGAAAGAATGAAAGAATTGAATCAGGACAATACTGGGCGGGTAAAAAGAT
TACCACCCATCGTTCGAGGAGGGGCCATTGACAGATACTGGCCCACCGCCGATGGGCGCCTGGTCGAGTATGACATAGAT
GAAGTGGTGTATGATGAAGATTCACCTTATCAGAACATTAAAATTTTACACTCGAAGCAATTTGGAAATATTCTCATTCT
GAGCGGGGATGTTAATTTGGCAGAGAGCGATTTGGCATATACCCGGGCCATCATGGGCAGCGGCAAAGAAGATTACACTG
GCAAGGATGTACTGATTCTGGGAGGTGGAGACGGCGGCATATTATGTGAAATAGTCAAATTGAAACCAAAGATGGTCACT
ATGGTAGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAACGTGTGGTGACGTCTTAGACCTTAA
GGGAGACTGCTATCAGGTTCTTATCGAAGACTGTATTCCAGTACTGAAGAGGTACGCCAAAGAAGGGAGAGAGTTTGATT
ATGTGATTAATGATTTGACAGCTGTTCCAATCTCCACCTCTCCAGAAGAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGAACTGTGTCAACTTGGGAGCCCTGTC
GCTCTATGAAGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNGTGGGTATTTTACACTGTTTGGAAGAAAGCTAAGCCTTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000013284 | possible_ortholog | 3 retrogenes | |
| Callithrix jacchus | ENSCJAG00000033933 | ortholog_one2many | 1 retrogene | |
| Cavia porcellus | ENSCPOG00000006176 | ortholog_one2one | 2 retrogenes | |
| Echinops telfairi | ENSETEG00000010098 | ortholog_one2one | 2 retrogenes | |
| Homo sapiens | ENSG00000102172 | ortholog_one2one | 5 retrogenes | |
| Gorilla gorilla | ENSGGOG00000003123 | ortholog_one2many | 3 retrogenes | |
| Microcebus murinus | ENSMICG00000000192 | ortholog_one2one | 3 retrogenes | |
| Myotis lucifugus | ENSMLUG00000013185 | possible_ortholog | 3 retrogenes | |
| Macaca mulatta | ENSMMUG00000020392 | ortholog_one2one | 2 retrogenes | |
| Monodelphis domestica | ENSMODG00000007897 | ortholog_one2many | 1 retrogene | |
| Mus musculus | ENSMUSG00000071708 | ortholog_one2one | 6 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000009955 | ortholog_one2one | 4 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000006016 | ortholog_one2one | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000020182 | ortholog_one2many | 4 retrogenes | |
| Rattus norvegicus | ENSRNOG00000007688 | ortholog_one2many | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_tbel_1630 | 88.57 | 67.43 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_tbel_1893 | 87.32 | 68.73 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_tbel_3570 | 60.95 | 53.42 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSTBEG00000012109 retrocopies