Parental gene:

ENSSSCG00000026942

Aliases:None
Description:None
Organism:Pig (Sus scrofa)
Coordinates:GL894710.2:53786..76871(+)


>ENSSSCG00000026942
GTACGTATAGCAGCGAAATTCATCATTCATGCCCCTCCTGGAGAATTTAATGAGGTGTTTAATGATGTTCGGTTACTGCT
TAATAATGATAATCTTCTCAGGGAAGGAGCAGCCCATGCATTTGCACAGTATAACCTGGACCAGTTTACTCCAGTAAAAA
TTGAAGGTTATGAAGATCAGGTATTGATAACAGAACATGGTGACTTGGGAAATGGAAAGTTTTTGGATCCAAAAAACAGA
ATCTGTTTCAAATTTGATCACTTAAGAAAGGAAGCAACTGATCCAAGACCCTATGAAGCAGAAAATGCAGTTGAATCATG
GAGAACTTCAGTAGAAACTGCTCTGCGAGCTTATGTAAAAGAACATTATCCGAATGGAGTCTGCACTGTATATGGTAAAA
AAATAGATGGGCAGCAAACCATTATTGCATGCATAGAAAGCCATCAGTTTCAAGCAAAAAACTTTTGGAATGGTCGTTGG
AGGTCAGAGTGGAAGTTTACAATCACTCCTTCAACCACTCAGGTGGTTGGCATCTTGAAAATTCAGGTTCATTATTATGA
AGATGGTAATGTTCAGCTAGTGAGTCATAAAGATATACAAGATTCCCTAACAGTGTCTAATGAGGTGCAAACAGCAAAAG
AATTTATAAAGATTGTAGAGGCTGCAGAAAATGAATATCAGACTGCCATCAGTGAGAATTATCAGACAATGTCGGACACT
ACTTTCAAAGCCTTACGTCGACAGTTGCCAGTTACACGCACTAAGATTGATTGGAACAAGATCCTTAGCTACAAGATTGG
CAAAGAGATGCAGAATGCATAA

Library Parental gene expression (RPM)
SRP014902_placenta 0 .00 RPM
SRP014902_testis 0 .00 RPM
SRP018856_adipose 0 .00 RPM
SRP018288_kidney 0 .00 RPM
SRP018288_lung 0 .00 RPM
SRP018288_liver 0 .00 RPM
SRP018288_heart 0 .05 RPM
SRP035408_liver 0 .00 RPM
SRP035408_brain 0 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000004925 ortholog_one2many 2 retrogenes
retro_chof_2296, retro_chof_680,
Cavia porcellus ENSCPOG00000007677 ortholog_one2many 1 retrogene
retro_cpor_205,
Dasypus novemcinctus ENSDNOG00000005771 ortholog_one2many 1 retrogene
retro_dnov_1892,
Dipodomys ordii ENSDORG00000016226 ortholog_one2many 1 retrogene
retro_dord_266,
Erinaceus europaeus ENSEEUG00000009063 ortholog_one2many 5 retrogenes
retro_eeur_142, retro_eeur_167, retro_eeur_351, retro_eeur_365, retro_eeur_482,
Echinops telfairi ENSETEG00000019711 ortholog_one2many 3 retrogenes
retro_etel_1516, retro_etel_2020, retro_etel_442,
Gorilla gorilla ENSGGOG00000012158 ortholog_one2many 1 retrogene
retro_ggor_1774,
Microcebus murinus ENSMICG00000000707 ortholog_one2many 1 retrogene
retro_mmur_1224,
Myotis lucifugus ENSMLUG00000007910 ortholog_one2many 1 retrogene
retro_mluc_2595,
Oryctolagus cuniculus ENSOCUG00000003591 ortholog_one2many 2 retrogenes
retro_ocun_1531, retro_ocun_873,
Pongo abelii ENSPPYG00000017933 ortholog_one2many 1 retrogene
retro_pabe_1321,
Ictidomys tridecemlineatus ENSSTOG00000024828 ortholog_one2many 1 retrogene
retro_itri_1561,
Tupaia belangeri ENSTBEG00000012657 ortholog_one2many 2 retrogenes
retro_tbel_2004, retro_tbel_2228,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_sscr_600 74.47 67.77
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_sscr_1127 75.00 67.77
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSSSCG00000026942 retrocopies