Parental gene:

CAPZA2, ENSDNOG00000005771

Aliases:None
Description:capping protein (actin filament) muscle Z-line, alpha 2 [Source:HGNC Symbol;Acc:1490]
Organism:Armadillo (Dasypus novemcinctus)
Coordinates:GeneScaffold_7076:3211..69551(+)


>ENSDNOG00000005771
GTGCGTATAGCAGCAAAATTCATCATTCATGCCCCTCCTGGAGAATTTAATGAGGTGTTTAATGATGTTCGGTTACTGCT
TAATAATGATAATCTTCTCAGGGAGGGAGCAGCCCATGCATTTGCACAGTATAACTTGGACCAGTTTACTCCTGTAAAAA
TTGAAGGTTATGAAGATCAGNNATTGATAACAGAACATGGTGACTTGGGAAATGGAAAGTTTTTGGATCCAAAAAACAGA
ATCTGTTTCAAATTTGATCACTTAAGAAAGGAAGCAACTGATCCAAGACCCTATGAAGCAGAAAATGCAATTGAATCATG
GAGAACTTCTATAGAAACTGCTCTGCGAGCTTATGTTAAAGAGCATTATCCGAATGGAGTCTGCACTGTATATGGTAAAA
AAATAGATGGACAGCAAACCATTATTGCATGCATAGAAAGCCATCAGTTCCAAGCAAAAAACTTCTGNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATGAGGTACAAACAGCAAAAG
AATTTATTAAGATCGTAGAAGCTGCAGAAAATGAATACCAGACTGCCATCAGTGAGAATTATCAGACAATGTCGGATACT
ACTTTCAAAGCCTTACGTCGACAGTTGCCAGTTACACGCACTAAGATTGATTGGAACAAGATCCTTAGCTACAAGATTGG
CAAAGAGATGCAGAATGCATAA

Library Parental gene expression (RPM)
SRP012922_ascending_colon 23 .73 RPM
SRP012922_cerebellum 21 .72 RPM
SRP012922_heart 24 .13 RPM
SRP012922_kidney 16 .70 RPM
SRP012922_liver 8 .98 RPM
SRP012922_lung 21 .38 RPM
SRP012922_quadricep_muscle 52 .44 RPM
SRP012922_spleen 31 .48 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000004925 ortholog_one2one 2 retrogenes
retro_chof_2296, retro_chof_680,
Cavia porcellus ENSCPOG00000007677 ortholog_one2one 1 retrogene
retro_cpor_205,
Dipodomys ordii ENSDORG00000016226 ortholog_one2one 1 retrogene
retro_dord_266,
Erinaceus europaeus ENSEEUG00000009063 ortholog_one2one 5 retrogenes
retro_eeur_142, retro_eeur_167, retro_eeur_351, retro_eeur_365, retro_eeur_482,
Echinops telfairi ENSETEG00000019711 ortholog_one2one 3 retrogenes
retro_etel_1516, retro_etel_2020, retro_etel_442,
Gorilla gorilla ENSGGOG00000012158 ortholog_one2one 1 retrogene
retro_ggor_1774,
Microcebus murinus ENSMICG00000000707 ortholog_one2one 1 retrogene
retro_mmur_1224,
Myotis lucifugus ENSMLUG00000007910 ortholog_one2one 1 retrogene
retro_mluc_2595,
Oryctolagus cuniculus ENSOCUG00000003591 ortholog_one2one 2 retrogenes
retro_ocun_1531, retro_ocun_873,
Pongo abelii ENSPPYG00000017933 ortholog_one2one 1 retrogene
retro_pabe_1321,
Sus scrofa ENSSSCG00000026942 ortholog_one2many 2 retrogenes
retro_sscr_1127, retro_sscr_600,
Ictidomys tridecemlineatus ENSSTOG00000024828 ortholog_one2one 1 retrogene
retro_itri_1561,
Tupaia belangeri ENSTBEG00000012657 ortholog_one2one 2 retrogenes
retro_tbel_2004, retro_tbel_2228,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_dnov_1892 67.55 54.58
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Download FASTA sequences of all ENSDNOG00000005771 retrocopies