Parental gene:

UFM1, ENSSSCG00000021299

Aliases:None
Description:None
Organism:Pig (Sus scrofa)
Coordinates:GL895643.2:124018..128146(-)


>ENSSSCG00000021299
CTCAGTGTTCCTGAAAGTACACCTTTCACAGCAGTCTTAAAGTTTGCAGCAGAAGAATTTAAAGTTCCTGCAGCAACAAG
TGCAATTATTACCAATGATGGAATAGGGATAAATCCTGCGCAGACTGCCGGAAATGTCTTTCTAAAGCATGGTTCAGAAC
TGCGAATAATTCCTAGAGATCGTGTTGGAAGTTGT

Library Parental gene expression (RPM)
SRP014902_placenta 1 .99 RPM
SRP014902_testis 2 .69 RPM
SRP018856_adipose 4 .04 RPM
SRP018288_kidney 13 .40 RPM
SRP018288_lung 3 .56 RPM
SRP018288_liver 8 .64 RPM
SRP018288_heart 4 .56 RPM
SRP035408_liver 4 .08 RPM
SRP035408_brain 2 .03 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000006026 ortholog_one2one 1 retrogene
retro_cfam_1785,
Callithrix jacchus ENSCJAG00000017903 ortholog_one2one 4 retrogenes
retro_cjac_1489, retro_cjac_2545, retro_cjac_2807, retro_cjac_2872,
Equus caballus ENSECAG00000014564 ortholog_one2one 3 retrogenes
retro_ecab_293, retro_ecab_353, retro_ecab_392,
Erinaceus europaeus ENSEEUG00000008471 ortholog_one2one 1 retrogene
retro_eeur_187,
Homo sapiens ENSG00000120686 ortholog_one2one 4 retrogenes
retro_hsap_1825, retro_hsap_2177, retro_hsap_4098, retro_hsap_4767,
Gorilla gorilla ENSGGOG00000026214 ortholog_one2one 3 retrogenes
retro_ggor_2168, retro_ggor_2750, retro_ggor_2970,
Macropus eugenii ENSMEUG00000001660 ortholog_one2one 2 retrogenes
retro_meug_1215, retro_meug_1615,
Microcebus murinus ENSMICG00000008048 ortholog_one2one 1 retrogene
retro_mmur_1161,
Macaca mulatta ENSMMUG00000014990 ortholog_one2one 3 retrogenes
retro_mmul_1253, retro_mmul_2542, retro_mmul_908,
Mus musculus ENSMUSG00000027746 ortholog_one2one 2 retrogenes
retro_mmus_2246, retro_mmus_2311,
Nomascus leucogenys ENSNLEG00000002556 ortholog_one2one 3 retrogenes
retro_nleu_2973, retro_nleu_305, retro_nleu_567,
Otolemur garnettii ENSOGAG00000007023 ortholog_one2one 6 retrogenes
retro_ogar_2303, retro_ogar_2304, retro_ogar_2534, retro_ogar_2571, retro_ogar_617, retro_ogar_948,
Pongo abelii ENSPPYG00000005293 ortholog_one2one 4 retrogenes
retro_pabe_1492, retro_pabe_2061, retro_pabe_3354, retro_pabe_3710,
Pan troglodytes ENSPTRG00000040645 ortholog_one2one 4 retrogenes
retro_ptro_1169, retro_ptro_1660, retro_ptro_2779, retro_ptro_3174,
Rattus norvegicus ENSRNOG00000038176 ortholog_one2one 2 retrogenes
retro_rnor_2201, retro_rnor_2202,
Ictidomys tridecemlineatus ENSSTOG00000016449 ortholog_one2one 2 retrogenes
retro_itri_1685, retro_itri_1746,
Tarsius syrichta ENSTSYG00000011105 ortholog_one2one 1 retrogene
retro_tsyr_1979,
Tursiops truncatus ENSTTRG00000015482 ortholog_one2one 2 retrogenes
retro_ttru_1434, retro_ttru_518,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_sscr_584 70.49 92.31
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Download FASTA sequences of all ENSSSCG00000021299 retrocopies