Parental gene:

Ufm1, ENSMUSG00000027746

Aliases:None
Description:ubiquitin-fold modifier 1 [Source:MGI Symbol;Acc:MGI:1915140]
Organism:Mouse (Mus musculus)
Coordinates:3:53855211..53863830(-)


>ENSMUSG00000027746
ATGTCGAAGGTGTCCTTTAAAATCACGTTGACGTCGGACCCGCGGCTGCCGTACAAAGTTCTCAGTGTTCCTGAAAGTAC
GCCGTTCACAGCAGTGCTAAAGTTTGCAGCAGAAGAATTTAAAGTTCCTGCAGCTACAAGTGCGATTATTACTAATGATG
GAATAGGAATAAATCCTGCACAGACTGCTGGGAATGTTTTCCTGAAGCACGGCTCAGAACTGAGAATCATTCCTAGAGAC
CGAGTTGGAAGCTGCTAA

Library Parental gene expression (RPM)
SRP007412_brain 32 .89 RPM
SRP007412_cerebellum 34 .95 RPM
SRP007412_heart 20 .51 RPM
SRP007412_kidney 47 .87 RPM
SRP007412_liver 33 .86 RPM
SRP007412_testis 9 .83 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000006026 ortholog_one2one 1 retrogene
retro_cfam_1785,
Callithrix jacchus ENSCJAG00000017903 ortholog_one2one 4 retrogenes
retro_cjac_1489, retro_cjac_2545, retro_cjac_2807, retro_cjac_2872,
Equus caballus ENSECAG00000014564 ortholog_one2one 3 retrogenes
retro_ecab_293, retro_ecab_353, retro_ecab_392,
Erinaceus europaeus ENSEEUG00000008471 ortholog_one2one 1 retrogene
retro_eeur_187,
Homo sapiens ENSG00000120686 ortholog_one2one 4 retrogenes
retro_hsap_1825, retro_hsap_2177, retro_hsap_4098, retro_hsap_4767,
Gorilla gorilla ENSGGOG00000026214 ortholog_one2one 3 retrogenes
retro_ggor_2168, retro_ggor_2750, retro_ggor_2970,
Macropus eugenii ENSMEUG00000001660 ortholog_one2one 2 retrogenes
retro_meug_1215, retro_meug_1615,
Microcebus murinus ENSMICG00000008048 ortholog_one2one 1 retrogene
retro_mmur_1161,
Macaca mulatta ENSMMUG00000014990 ortholog_one2one 3 retrogenes
retro_mmul_1253, retro_mmul_2542, retro_mmul_908,
Nomascus leucogenys ENSNLEG00000002556 ortholog_one2one 3 retrogenes
retro_nleu_2973, retro_nleu_305, retro_nleu_567,
Otolemur garnettii ENSOGAG00000007023 ortholog_one2one 6 retrogenes
retro_ogar_2303, retro_ogar_2304, retro_ogar_2534, retro_ogar_2571, retro_ogar_617, retro_ogar_948,
Pongo abelii ENSPPYG00000005293 ortholog_one2one 4 retrogenes
retro_pabe_1492, retro_pabe_2061, retro_pabe_3354, retro_pabe_3710,
Pan troglodytes ENSPTRG00000040645 ortholog_one2one 4 retrogenes
retro_ptro_1169, retro_ptro_1660, retro_ptro_2779, retro_ptro_3174,
Rattus norvegicus ENSRNOG00000038176 ortholog_one2one 2 retrogenes
retro_rnor_2201, retro_rnor_2202,
Sus scrofa ENSSSCG00000021299 ortholog_one2one 1 retrogene
retro_sscr_584,
Ictidomys tridecemlineatus ENSSTOG00000016449 ortholog_one2one 2 retrogenes
retro_itri_1685, retro_itri_1746,
Tarsius syrichta ENSTSYG00000011105 ortholog_one2one 1 retrogene
retro_tsyr_1979,
Tursiops truncatus ENSTTRG00000015482 ortholog_one2one 2 retrogenes
retro_ttru_1434, retro_ttru_518,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_2246 86.21 100.00
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_mmus_2311 82.35 91.21
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSMUSG00000027746 retrocopies