Parental gene: | ENSSHAG00000016649 |
| Aliases: | None |
| Description: | None |
| Organism: | Tasmanian devil (Sarcophilus harrisii) |
| Coordinates: | GL861610.1:2270666..2290762(+) |
>ENSSHAG00000016649
ATGGGACGGAGATCTACATCATCCACCAAGAGTGGGAAGTTCATGAATCCCACTGACCAGGCTCGAAAAGAAGCCCGGAA
AAGGGAATTAAAAAAGAATAAGAAGCAACGAATGATGGTACGGGCAGCAGTACTAAAGATGAAGGATCCCAAACAGATTA
TCAGGGATATGGAGAAATTAGATGAGATGGAGTTCAACCCAGTACAGCAGCCACAGCTAAATGAAAAGGTGCTAAAAGAT
AAACGAAAAAAGCTTCGTGAAACTTTTGAACGCATTCTCAGACTCTATGAAAAAGAAAACCCAGATATCTACAAAGAGCT
TCGAAAATTAGAGGTGGAATATGAGCAGAAGAGGGCCCAGCTTAGCCAATACTTCGATGCAGTAAAGAATGCTCAGCATG
TTGAAGTGGAAAGCATCCCATTGCCAGATATGCCTCATGCTCCTTCTAATATATTGATTCAAGACATCCCATTGCCTGGT
GCACAGCCACCTTCCATTCTCAAAAAAACTTCTGCCTATGGACCTCCCACCAGGGCAATTTCTATACTTCCTCTTCTTGG
ACATGGTGTTCCTCGTTTGCCTCCTGGCAGAAAGCCTCCTGGCCCACCCCCTGGGCCACCTCCTCCCCAGGTTCTGCAAA
TGTATGGCCGTAAAGTGGGCTTTGCCTTAGAGCTTGCCCCTCGTCGACGAGAGGAGGATATTTTATATAGTCCAGAACTT
GCTCATCGTGGTCATGATGATGATGGTTCCAGCACCAGTGAAGATGAAGGTTATCCTGAAGACATGGATCAAGATAAGCA
TGATGACAGCAGTGATGACAGTGACACTGACAGGTCAGATGCTGACAGTGAAGGAGAGGAGTTCATGCACCGTGATGATG
AAGAAAGAGAGAACAATGAAGACAAAAAGTCAGGTCTTAGTGTACGATTTGCTGATGTTCCTGGAAAATCAAGAAAGAAA
AAGAAAAATATGAAGGAATTGACACCTCTTCAAGCTATGATGCTTAGAATGGCAGGTCAGGAAATTCCTGAAGAGGGGCG
AGAAGTTGAGGAATTTTCAGAGGATGATGATGAGGAAGATTCTGATGACTCTGAATCAGAAGATACTACACAGCAGCAGC
ACAAAGAAGAAACTCTTCCTGATGGGGCATCATCATCTCCTGTTTCCCAACAACAGCAACCACCTCCACAATCTGTTCCT
CCTACCCAAATACAGGCACCTCCCATGCCAGGACCACCTCCTCTTGGACCACCACCTGCTCCACCATTACGACCACCTGG
GCCACCCACTGGCCTTCCTCCTGGTCCACCTCCAGGAGCTCCTCCATTCTTAAGACCACCTGGAATGCCAGGGCTTCGAG
GGCCTTTACCTCGACTTTTACCTCCTGGTCCTCCACCAGGCAGACCTCCTGGTCCACCTCCAGGCCCACCTCCTGGTCTT
CCTCCAGGTCCTCCTCCACGAGGACCACCACCAAGGCTACCTCCCCCAGCACCTCCAGGTATCCCTCCACCCCGTCCTGG
TATGATGCGCCCACCTTTGGTGCCTCCACTTGGACCTGCTCCACCTGGGCTTTTCCCACCAGCTCCCTTGCCGAATCCAG
GGGTTTTAAGTGCCCCGCCTAATTTGATCCAGAGACCCAAAGTAGATGATACCAGTGCAGCCACTATTGAGAAGAAAGCC
ACAGCAACCATCAGTGCCAAGCCACGAATCACCAATCCCAAGGCAGAAATGACCCGATTTGTGCCCACTGCACTGAGGGT
CCAACGAAAAAACAAAGGAGCTACTGCTGCTCCCCAAAGAAAGTCAGAAGAGGATTCTACTCTGCCCCTTGCCAAAGCAG
TTCCTAAGTCTGTCCCCTCTGTGCCTGTTTCAGTACAAACCAAGGATGACGTATATGAAGCTTTCATGAACGAGATGGAG
GGACGACTGTGA
ATGGGACGGAGATCTACATCATCCACCAAGAGTGGGAAGTTCATGAATCCCACTGACCAGGCTCGAAAAGAAGCCCGGAA
AAGGGAATTAAAAAAGAATAAGAAGCAACGAATGATGGTACGGGCAGCAGTACTAAAGATGAAGGATCCCAAACAGATTA
TCAGGGATATGGAGAAATTAGATGAGATGGAGTTCAACCCAGTACAGCAGCCACAGCTAAATGAAAAGGTGCTAAAAGAT
AAACGAAAAAAGCTTCGTGAAACTTTTGAACGCATTCTCAGACTCTATGAAAAAGAAAACCCAGATATCTACAAAGAGCT
TCGAAAATTAGAGGTGGAATATGAGCAGAAGAGGGCCCAGCTTAGCCAATACTTCGATGCAGTAAAGAATGCTCAGCATG
TTGAAGTGGAAAGCATCCCATTGCCAGATATGCCTCATGCTCCTTCTAATATATTGATTCAAGACATCCCATTGCCTGGT
GCACAGCCACCTTCCATTCTCAAAAAAACTTCTGCCTATGGACCTCCCACCAGGGCAATTTCTATACTTCCTCTTCTTGG
ACATGGTGTTCCTCGTTTGCCTCCTGGCAGAAAGCCTCCTGGCCCACCCCCTGGGCCACCTCCTCCCCAGGTTCTGCAAA
TGTATGGCCGTAAAGTGGGCTTTGCCTTAGAGCTTGCCCCTCGTCGACGAGAGGAGGATATTTTATATAGTCCAGAACTT
GCTCATCGTGGTCATGATGATGATGGTTCCAGCACCAGTGAAGATGAAGGTTATCCTGAAGACATGGATCAAGATAAGCA
TGATGACAGCAGTGATGACAGTGACACTGACAGGTCAGATGCTGACAGTGAAGGAGAGGAGTTCATGCACCGTGATGATG
AAGAAAGAGAGAACAATGAAGACAAAAAGTCAGGTCTTAGTGTACGATTTGCTGATGTTCCTGGAAAATCAAGAAAGAAA
AAGAAAAATATGAAGGAATTGACACCTCTTCAAGCTATGATGCTTAGAATGGCAGGTCAGGAAATTCCTGAAGAGGGGCG
AGAAGTTGAGGAATTTTCAGAGGATGATGATGAGGAAGATTCTGATGACTCTGAATCAGAAGATACTACACAGCAGCAGC
ACAAAGAAGAAACTCTTCCTGATGGGGCATCATCATCTCCTGTTTCCCAACAACAGCAACCACCTCCACAATCTGTTCCT
CCTACCCAAATACAGGCACCTCCCATGCCAGGACCACCTCCTCTTGGACCACCACCTGCTCCACCATTACGACCACCTGG
GCCACCCACTGGCCTTCCTCCTGGTCCACCTCCAGGAGCTCCTCCATTCTTAAGACCACCTGGAATGCCAGGGCTTCGAG
GGCCTTTACCTCGACTTTTACCTCCTGGTCCTCCACCAGGCAGACCTCCTGGTCCACCTCCAGGCCCACCTCCTGGTCTT
CCTCCAGGTCCTCCTCCACGAGGACCACCACCAAGGCTACCTCCCCCAGCACCTCCAGGTATCCCTCCACCCCGTCCTGG
TATGATGCGCCCACCTTTGGTGCCTCCACTTGGACCTGCTCCACCTGGGCTTTTCCCACCAGCTCCCTTGCCGAATCCAG
GGGTTTTAAGTGCCCCGCCTAATTTGATCCAGAGACCCAAAGTAGATGATACCAGTGCAGCCACTATTGAGAAGAAAGCC
ACAGCAACCATCAGTGCCAAGCCACGAATCACCAATCCCAAGGCAGAAATGACCCGATTTGTGCCCACTGCACTGAGGGT
CCAACGAAAAAACAAAGGAGCTACTGCTGCTCCCCAAAGAAAGTCAGAAGAGGATTCTACTCTGCCCCTTGCCAAAGCAG
TTCCTAAGTCTGTCCCCTCTGTGCCTGTTTCAGTACAAACCAAGGATGACGTATATGAAGCTTTCATGAACGAGATGGAG
GGACGACTGTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000014759 | ortholog_many2many | 1 retrogene | |
| Canis familiaris | ENSCAFG00000012926 | ortholog_one2many | 2 retrogenes | |
| Callithrix jacchus | ENSCJAG00000021611 | ortholog_many2many | 1 retrogene | |
| Homo sapiens | ENSG00000084463 | ortholog_one2many | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000004448 | ortholog_one2many | 3 retrogenes | |
| Macropus eugenii | ENSMEUG00000013971 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000015216 | ortholog_many2many | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000019299 | ortholog_many2many | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000017949 | ortholog_one2many | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000011619 | ortholog_one2many | 1 retrogene | |
| Mus musculus | ENSMUSG00000030216 | ortholog_one2many | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000003926 | ortholog_one2many | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000017177 | ortholog_one2many | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000010518 | ortholog_many2many | 1 retrogene | |
| Ochotona princeps | ENSOPRG00000015008 | ortholog_one2many | 3 retrogenes | |
| Pongo abelii | ENSPPYG00000004323 | ortholog_one2many | 3 retrogenes | |
| Pan troglodytes | ENSPTRG00000004724 | ortholog_one2many | 3 retrogenes | |
| Rattus norvegicus | ENSRNOG00000005505 | ortholog_many2many | 3 retrogenes | |
| Rattus norvegicus | ENSRNOG00000049593 | ortholog_many2many | 1 retrogene | |
| Sorex araneus | ENSSARG00000007085 | ortholog_one2many | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000003394 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_shar_81 | 67.65 | 78.69 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSSHAG00000016649 retrocopies