Parental gene:

Lsm2, ENSRNOG00000048725

Aliases:Lsm2, G7b
Description:LSM2 homolog, U6 small nuclear RNA associated isoform 1 [Source:RefSeq peptide;Acc:NP_001004073]
Organism:Rat (Rattus norvegicus)
Coordinates:20:7040456..7043830(+)


>ENSRNOG00000048725
ATGGTTTTTTTGGGGAAACTTCCAGCAAGTCCAAGAGAAAGCCCACGGGCGCCGGGGGAGAACGGAAAGCTAGTCTTGCA
TTTCCGTGCTGGAGATCAGGATTTTGTGAGGCTCTTCTACTCCTTTTTCAAGTCCCTTGTGGGCAAGGATGTAGTCGTGG
AACTCAAGAATGATCTGAGCATCTGTGGAACCCTGCACTCTGTGGACCAGTACCTCAATATCAAACTAACCGACATCAGT
GTCACAGACCCTGAAAAATATCCTCACATGTTATCCGTCAAGAACTGCTTCATCAGGGGCTCGGTTGTCCGCTACGTGCA
GCTGCCAGCAGACGAGGTGGACACACAGCTGTTGCAGGATGCAGCAAGGAAGGAAGCCCTTCAGCAGAAACAGTGA

Library Parental gene expression (RPM)
SRP017611_liver 4 .50 RPM
SRP017611_kidney 7 .19 RPM
SRP017611_brain 4 .89 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000002601 ortholog_one2one 2 retrogenes
retro_cjac_1828, retro_cjac_2088,
Felis catus ENSFCAG00000004511 ortholog_one2one 1 retrogene
retro_fcat_309,
Macaca mulatta ENSMMUG00000006832 ortholog_one2one 3 retrogenes
retro_mmul_1389, retro_mmul_1875, retro_mmul_2099,
Mus musculus ENSMUSG00000007050 ortholog_one2one 1 retrogene
retro_mmus_931,
Nomascus leucogenys ENSNLEG00000006371 ortholog_one2one 1 retrogene
retro_nleu_960,
Ochotona princeps ENSOPRG00000003668 ortholog_one2one 2 retrogenes
retro_opri_250, retro_opri_917,
Pongo abelii ENSPPYG00000016461 ortholog_one2one 1 retrogene
retro_pabe_2765,
Pan troglodytes ENSPTRG00000017986 ortholog_one2one 3 retrogenes
retro_ptro_1349, retro_ptro_2063, retro_ptro_2284,
Ictidomys tridecemlineatus ENSSTOG00000013144 ortholog_one2one 1 retrogene
retro_itri_189,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_1463 93.59 59.54
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Download FASTA sequences of all ENSRNOG00000048725 retrocopies