Parental gene: | LSM2, ENSMMUG00000006832 |
| Aliases: | None |
| Description: | U6 snRNA-associated Sm-like protein LSm2 [Source:RefSeq peptide;Acc:NP_001247614] |
| Organism: | Rhesus macaque (Macaca mulatta) |
| Coordinates: | 4:31444564..31455091(-) |
>ENSMMUG00000006832
CTCTTCTATTCTTTTTTCAAGTCCCTTGTGGGCAAGGATGTGGTCGTGGAACTCAAGAATGACCTGAGCATCTGTGGAAC
CCTCCATTCTGTGGATCAGTATCTCAACATCAAACTAACTGACATCAGTGTCACAGACCCTGAGAAATATCCTCACATGT
TATCAGTGAAGAACTGCTTCATTCGGGGCTCAGTGGTCCGATATGTGCAGCTGCCAGCAGACGAGGTCGACACACAGTTG
CTGCAGGATGCGGCAAGGAAAGAAGCCCTGCAGCAGAAACAGTGA
CTCTTCTATTCTTTTTTCAAGTCCCTTGTGGGCAAGGATGTGGTCGTGGAACTCAAGAATGACCTGAGCATCTGTGGAAC
CCTCCATTCTGTGGATCAGTATCTCAACATCAAACTAACTGACATCAGTGTCACAGACCCTGAGAAATATCCTCACATGT
TATCAGTGAAGAACTGCTTCATTCGGGGCTCAGTGGTCCGATATGTGCAGCTGCCAGCAGACGAGGTCGACACACAGTTG
CTGCAGGATGCGGCAAGGAAAGAAGCCCTGCAGCAGAAACAGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 6 .58 RPM |
| SRP007412_brain | 4 .48 RPM |
| SRP007412_cerebellum | 6 .13 RPM |
| SRP007412_heart | 2 .89 RPM |
| SRP007412_kidney | 6 .46 RPM |
| SRP007412_liver | 4 .24 RPM |
| SRP007412_testis | 14 .51 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000002601 | ortholog_one2one | 2 retrogenes | |
| Felis catus | ENSFCAG00000004511 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000007050 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000006371 | ortholog_one2one | 1 retrogene | |
| Ochotona princeps | ENSOPRG00000003668 | ortholog_one2one | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000016461 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000017986 | ortholog_one2one | 3 retrogenes | |
| Rattus norvegicus | ENSRNOG00000048725 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000013144 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmul_1389 | 71.15 | 55.32 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmul_1875 | 74.55 | 56.38 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_mmul_2099 | 86.25 | 85.11 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMMUG00000006832 retrocopies