Parental gene:

Tcea1, ENSRNOG00000022323

Aliases:None
Description:Transcription elongation factor A protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q4KLL0]
Organism:Rat (Rattus norvegicus)
Coordinates:5:19293485..19330732(-)


>ENSRNOG00000022323
ATGGAGGACGAGGTGGTTCGCATTGCCAAGAAGATGGACAAAATGGTGCAGAAAAAGAACGCGGCCGGTGCATTGGATTT
GCTGAAAGAGCTTAAGAATATTCCCATGACCCTGGAATTATTACAGTCCACGAGAATTGGAATGTCTGTCAATGCTATTC
GCAAGCAGAGTACAGATGAAGAAGTCACATCTCTAGCCAAATCACTCATCAAATCCTGGAAAAAATTACTAGATGGACCA
TCAACTGATAAAGACTCTGAAGAAAAGAAAAAAGAACCTGCAATTTCATCACAGAATAGCCCTGAAGCAAGAGAAGAAAG
TAGTTCTAGCAGCCATGTAAGCAGCAGAAAGGATGAGACAAATGCTCGAGATACTTATGTTTCATCTTTTCCTCGGGCAC
CAAGCACTTCTGATTCTGTGCGGCTCAAGTGTAGGGAGATGCTTGCCGCAGCTCTCCGGACAGGAGATGATTATGTTGCT
ATTGGAGCTGATGAGGAAGAACTGGGATCTCAGATTGAGGAAGCTATATATCAAGAAATAAGGAATACAGACATGAAATA
CAAAAACAGAGTACGAAGTAGGATATCAAATCTTAAAGATGCAAAGAATCCAAATTTAAGGAAAAATGTGCTGTGTGGGA
ATATTCCTCCTGACCTGTTTGCTAGAATGACAGCAGAGGAAATGGCTAGTGATGAGCTCAAAGAGATGAGGAAAAACCTG
ACCAAAGAAGCCATCAGGGAGCATCAGATGGCCAAGACCGGTGGGACCCAGACTGACTTGTTCACTTGTGGCAAATGTAA
AAAGAAGAACTGCACTTACACACAGGTGCAAACTCGTAGTGCTGATGAACCAATGACAACTTTTGTTGTATGTAATGAAT
GTGGAAATCGGTGGAAGTTCTGTTGA

Library Parental gene expression (RPM)
SRP017611_liver 14 .66 RPM
SRP017611_kidney 33 .98 RPM
SRP017611_brain 25 .02 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000001247 ortholog_one2many 1 retrogene
retro_chof_458,
Callithrix jacchus ENSCJAG00000014407 ortholog_one2many 1 retrogene
retro_cjac_2095,
Dasypus novemcinctus ENSDNOG00000013799 ortholog_one2many 4 retrogenes
retro_dnov_1315, retro_dnov_1853, retro_dnov_839, retro_dnov_952,
Erinaceus europaeus ENSEEUG00000009220 ortholog_one2many 1 retrogene
retro_eeur_73,
Homo sapiens ENSG00000187735 ortholog_one2many 4 retrogenes
retro_hsap_2634, retro_hsap_4159, retro_hsap_4200, retro_hsap_4243,
Gorilla gorilla ENSGGOG00000023652 ortholog_one2many 3 retrogenes
retro_ggor_2794, retro_ggor_2814, retro_ggor_2844,
Macaca mulatta ENSMMUG00000016022 ortholog_one2many 1 retrogene
retro_mmul_1146,
Mus musculus ENSMUSG00000033813 ortholog_one2many 2 retrogenes
retro_mmus_1369, retro_mmus_3559,
Nomascus leucogenys ENSNLEG00000000981 ortholog_one2many 3 retrogenes
retro_nleu_1028, retro_nleu_1374, retro_nleu_1384,
Oryctolagus cuniculus ENSOCUG00000007474 ortholog_many2many 3 retrogenes
retro_ocun_1382, retro_ocun_401, retro_ocun_852,
Pongo abelii ENSPPYG00000018589 ortholog_one2many 3 retrogenes
retro_pabe_3395, retro_pabe_3436, retro_pabe_3455,
Pan troglodytes ENSPTRG00000020251 ortholog_one2many 2 retrogenes
retro_ptro_2851, retro_ptro_2884,
Sarcophilus harrisii ENSSHAG00000013661 ortholog_many2many 1 retrogene
retro_shar_50,
Ictidomys tridecemlineatus ENSSTOG00000021179 ortholog_one2many 1 retrogene
retro_itri_1745,
Tarsius syrichta ENSTSYG00000001030 ortholog_one2many 1 retrogene
retro_tsyr_1624,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_1089 100.00 100.00
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Download FASTA sequences of all ENSRNOG00000022323 retrocopies