Parental gene: | ENSOCUG00000007474 |
| Aliases: | None |
| Description: | None |
| Organism: | Rabbit (Oryctolagus cuniculus) |
| Coordinates: | 3:69127459..69153987(-) |
>ENSOCUG00000007474
TTGCAGTCCACAAGAATTGGAATGTCAGTTAACGCTATTCGCAAGCAAAGTACAGATGAAGAAGTTACATCTTTAGCAAA
GTCTCTCATCAAATCCTGGAAAAAGCTATTAGATGGACCATCAACAGAAAAAGACCCTGAAGAAAAGAAAAAAGAACCTG
CAATTACATCACAGAATAGCCCTGAGGCAAGAGAGGAAAGTAGCTCCAGTGGCAACGTGAGCAACAGAAAGGATGAGACA
AATGCTCGAGATACTTACGTTTCATCTTTTCCTCGGGCACCAAGCACTTCTGATTCTGTGCGGTTAAAGTGTAGGGAGAT
GCTGGCTGCTGCTCTCCGAACAGGAGATGACTACGTTGCCATTGGAGCTGATGAGGAAGAATTGGGATCTCAAATTGACC
TAGTACCTATATACCAAGAAATAAGGAATACAGACATGAAATACAAAAATAGAGTACGAAGTAGGATATCAAATCTTAAG
GATGCAAAAAATCCAAATTTAAGGAAAAATGTATTGTGTGGGAATATTCCTCCTGATTTATTTGCTAGAATGACGGCAGA
GGAAATGGCTAGTGATGAGCTCAAAGAAATGCGGAAAAACTTGACCAAAGAAGCCATCAGAGAACATCAGATGGCCAAGA
CAGGTGGAACGCAGACTGACTTGTTCACATGTGGCAAATGTAAAAAGAAGAATTGCACCTACACTCAGGTGCAAACCCGT
AGTGCTGATGAACCGATGACCACATTTGTTGTTTGCAATGAATGTGGAAATCGATGGAAGGTATGT
TTGCAGTCCACAAGAATTGGAATGTCAGTTAACGCTATTCGCAAGCAAAGTACAGATGAAGAAGTTACATCTTTAGCAAA
GTCTCTCATCAAATCCTGGAAAAAGCTATTAGATGGACCATCAACAGAAAAAGACCCTGAAGAAAAGAAAAAAGAACCTG
CAATTACATCACAGAATAGCCCTGAGGCAAGAGAGGAAAGTAGCTCCAGTGGCAACGTGAGCAACAGAAAGGATGAGACA
AATGCTCGAGATACTTACGTTTCATCTTTTCCTCGGGCACCAAGCACTTCTGATTCTGTGCGGTTAAAGTGTAGGGAGAT
GCTGGCTGCTGCTCTCCGAACAGGAGATGACTACGTTGCCATTGGAGCTGATGAGGAAGAATTGGGATCTCAAATTGACC
TAGTACCTATATACCAAGAAATAAGGAATACAGACATGAAATACAAAAATAGAGTACGAAGTAGGATATCAAATCTTAAG
GATGCAAAAAATCCAAATTTAAGGAAAAATGTATTGTGTGGGAATATTCCTCCTGATTTATTTGCTAGAATGACGGCAGA
GGAAATGGCTAGTGATGAGCTCAAAGAAATGCGGAAAAACTTGACCAAAGAAGCCATCAGAGAACATCAGATGGCCAAGA
CAGGTGGAACGCAGACTGACTTGTTCACATGTGGCAAATGTAAAAAGAAGAATTGCACCTACACTCAGGTGCAAACCCGT
AGTGCTGATGAACCGATGACCACATTTGTTGTTTGCAATGAATGTGGAAATCGATGGAAGGTATGT
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 3 .01 RPM |
| SRP017611_kidney | 6 .69 RPM |
| SRP017611_brain | 7 .40 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000001247 | ortholog_one2many | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000014407 | ortholog_one2many | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000013799 | ortholog_one2many | 4 retrogenes | |
| Erinaceus europaeus | ENSEEUG00000009220 | ortholog_one2many | 1 retrogene | |
| Homo sapiens | ENSG00000187735 | ortholog_one2many | 4 retrogenes | |
| Gorilla gorilla | ENSGGOG00000023652 | ortholog_one2many | 3 retrogenes | |
| Macaca mulatta | ENSMMUG00000016022 | ortholog_one2many | 1 retrogene | |
| Mus musculus | ENSMUSG00000033813 | ortholog_one2many | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000000981 | ortholog_one2many | 3 retrogenes | |
| Pongo abelii | ENSPPYG00000018589 | ortholog_one2many | 3 retrogenes | |
| Pan troglodytes | ENSPTRG00000020251 | ortholog_one2many | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000022323 | ortholog_many2many | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000013661 | ortholog_many2many | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000021179 | ortholog_one2many | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000001030 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ocun_401 | 89.64 | 84.73 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ocun_852 | 88.96 | 58.78 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ocun_1382 | 97.71 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOCUG00000007474 retrocopies