Parental gene:

Txnl4a, ENSRNOG00000017596

Aliases:None
Description:thioredoxin-like 4A [Source:MGI Symbol;Acc:MGI:1351613]
Organism:Rat (Rattus norvegicus)
Coordinates:18:72067549..72082824(-)


>ENSRNOG00000017596
ATGTCGTACATGCTTCCGCATCTGCACAATGGCTGGCAGGTAGACCAGGCCATTCTTTCGGAGGAGGACCGCGTGGTCGT
CATTCGCTTCGGACACGACTGGGACCCCACTTGCATGAAGATGGACGAGGTTCTGTACAGCATTGCCGAAAAGGTTAAAA
ATTTTGCAGTTATTTATCTTGTGGATATTACAGAAGTACCTGACTTCAACAAGATGTATGAGCTCTATGACCCATGCACG
GTCATGTTCTTCTTCAGAAACAAACACATCATGATTGATTTGGGCACTGGTAACAATAACAAGATCAACTGGGCCATGGA
AGACAAGCAGGAAATGGTTGACATCATAGAGACCGTGTACCGTGGCGCCCGCAAAGGCCGAGGCCTGGTGGTGTCGCCCA
AGGACTATTCCACAAAGTACAGATACTGA

Library Parental gene expression (RPM)
SRP017611_liver 9 .95 RPM
SRP017611_kidney 17 .31 RPM
SRP017611_brain 19 .41 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000010130 ortholog_one2one 2 retrogenes
retro_cjac_2805, retro_cjac_3659,
Homo sapiens ENSG00000141759 ortholog_one2one 2 retrogenes
retro_hsap_2185, retro_hsap_4900,
Gorilla gorilla ENSGGOG00000005285 ortholog_one2one 2 retrogenes
retro_ggor_1731, retro_ggor_3060,
Loxodonta africana ENSLAFG00000003190 ortholog_one2many 1 retrogene
retro_lafr_198,
Myotis lucifugus ENSMLUG00000009188 ortholog_one2one 1 retrogene
retro_mluc_562,
Macaca mulatta ENSMMUG00000001613 ortholog_one2one 2 retrogenes
retro_mmul_2636, retro_mmul_913,
Nomascus leucogenys ENSNLEG00000008378 ortholog_one2one 2 retrogenes
retro_nleu_1268, retro_nleu_314,
Otolemur garnettii ENSOGAG00000034753 ortholog_one2one 1 retrogene
retro_ogar_1751,
Pan troglodytes ENSPTRG00000010136 ortholog_one2one 1 retrogene
retro_ptro_1663,
Ictidomys tridecemlineatus ENSSTOG00000022277 ortholog_one2one 1 retrogene
retro_itri_1063,
Tarsius syrichta ENSTSYG00000009428 ortholog_one2one 1 retrogene
retro_tsyr_240,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_1358 89.86 96.48
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2. retro_rnor_2458 60.71 59.15
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Download FASTA sequences of all ENSRNOG00000017596 retrocopies