Parental gene:

TXNL4A, ENSG00000141759

Aliases:TXNL4A, DIB1, DIM1, HsT161, SNRNP15, TXNL4, U5-15kD
Description:thioredoxin-like 4A [Source:HGNC Symbol;Acc:30551]
Organism:Human (Homo sapiens)
Coordinates:18:77732866..77793949(-)


>ENSG00000141759
ATGTCGTACATGCTCCCGCACCTGCACAACGGCTGGCAGGTGGACCAGGCCATCCTCTCGGAGGAGGACCGCGTGGTCGT
CATCCGCTTCGGCCACGACTGGGATCCTACGTGCATGAAGATGGACGAGGTCCTGTACAGCATCGCCGAGAAGGTTAAAA
ATTTTGCAGTTATTTATCTTGTGGATATTACAGAAGTGCCTGACTTCAACAAAATGTATGAGTTATACGATCCATGTACT
GTCATGTTTTTCTTCAGGAACAAGCACATCATGATTGACTTGGGGACTGGCAACAACAACAAGATTAACTGGGCCATGGA
GGACAAGCAGGAGATGGTGGACATCATCGAGACGGTGTACCGCGGGGCCCGCAAAGGCCGCGGCCTGGTGGTGTCCCCCA
AGGACTACTCCACCAAGTACCGCTACTGA

Library Parental gene expression (RPM)
bodymap2_liver 21 .90 RPM
bodymap2_lung 24 .72 RPM
bodymap2_breast 37 .78 RPM
bodymap2_adipose 28 .58 RPM
bodymap2_adrenal 40 .88 RPM
bodymap2_skeletal_muscle 21 .32 RPM
bodymap2_thyroid 34 .99 RPM
bodymap2_prostate 22 .01 RPM
bodymap2_colon 32 .56 RPM
bodymap2_testis 43 .98 RPM
bodymap2_brain 47 .16 RPM
bodymap2_heart 17 .17 RPM
bodymap2_white_blood_cells 27 .09 RPM
bodymap2_lymph_node 30 .96 RPM
bodymap2_ovary 23 .17 RPM
bodymap2_kidney 29 .57 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000010130 ortholog_one2one 2 retrogenes
retro_cjac_2805, retro_cjac_3659,
Gorilla gorilla ENSGGOG00000005285 ortholog_one2one 2 retrogenes
retro_ggor_1731, retro_ggor_3060,
Loxodonta africana ENSLAFG00000003190 ortholog_one2many 1 retrogene
retro_lafr_198,
Myotis lucifugus ENSMLUG00000009188 ortholog_one2one 1 retrogene
retro_mluc_562,
Macaca mulatta ENSMMUG00000001613 ortholog_one2one 2 retrogenes
retro_mmul_2636, retro_mmul_913,
Nomascus leucogenys ENSNLEG00000008378 ortholog_one2one 2 retrogenes
retro_nleu_1268, retro_nleu_314,
Otolemur garnettii ENSOGAG00000034753 ortholog_one2one 1 retrogene
retro_ogar_1751,
Pan troglodytes ENSPTRG00000010136 ortholog_one2one 1 retrogene
retro_ptro_1663,
Rattus norvegicus ENSRNOG00000017596 ortholog_one2one 2 retrogenes
retro_rnor_1358, retro_rnor_2458,
Ictidomys tridecemlineatus ENSSTOG00000022277 ortholog_one2one 1 retrogene
retro_itri_1063,
Tarsius syrichta ENSTSYG00000009428 ortholog_one2one 1 retrogene
retro_tsyr_240,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_2185 78.32 100.00
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2. retro_hsap_4900 61.47 74.65
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Download FASTA sequences of all ENSG00000141759 retrocopies