Parental gene:

Mrpl15, ENSRNOG00000008566

Aliases:None
Description:39S ribosomal protein L15, mitochondrial [Source:RefSeq peptide;Acc:NP_001100103]
Organism:Rat (Rattus norvegicus)
Coordinates:5:19392157..19402384(+)


>ENSRNOG00000008566
ATGGCTGGCATGGCGTTTGGCCGCGGGACCAGTCTGGACCTTCTGCGGTCCTTGCCGAGAGTGAGCCTGGCCAATCTGAA
GCCCAGTCTTAACTCCAGAAAACGGGAAAGACGTCCAAGAGATCGGAGAAGAGGTAGGAAGTGTGGCAGAGGCCATAAAG
GAGAAAGACAGAGAGGAACCCGGCCCAGGCTGGGCTTTGAGGGAGGGCAGACTCCATTTTACATCCGAATCCCAAAATAT
GGATTTAATGAAGGACATAGTTTCAGGCACCAGTATCAGCCTCTGAGTCTCAGGAGACTACAGTATCTCATTGATTTAGG
TCGAGTTGATCCAACTCAACCTATTGACTTAACGCAGCTTGTGAATGGGAGAGGTGTGACCATCCAGCCACTTAAAAGGG
ATTATGGGGTCCAGCTGGTTGAAGAGGGTGCTGATACTTTTCAAGCAAAAGTTAATATTGAGGTGCAGATGGCTTCAGAA
TTAGCCATTGCTGCAATTGAAAAAAATGGTGGTGTTGTTACTACAGCCTTCTATGACCCAAGAAGTCTAGGGGACTTGAT
GCCCTCTTCTGACTTCCATGGGTGCCAGGCGAGATACTCATTCATACACATAAGATAA

Library Parental gene expression (RPM)
SRP017611_liver 22 .39 RPM
SRP017611_kidney 44 .17 RPM
SRP017611_brain 15 .24 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000001174 ortholog_one2one 1 retrogene
retro_btau_324,
Canis familiaris ENSCAFG00000006988 ortholog_one2one 2 retrogenes
retro_cfam_1573, retro_cfam_511,
Choloepus hoffmanni ENSCHOG00000005299 ortholog_one2one 3 retrogenes
retro_chof_1379, retro_chof_1719, retro_chof_746,
Callithrix jacchus ENSCJAG00000016719 ortholog_one2one 1 retrogene
retro_cjac_2230,
Dasypus novemcinctus ENSDNOG00000017664 ortholog_one2one 1 retrogene
retro_dnov_364,
Erinaceus europaeus ENSEEUG00000001454 ortholog_one2one 2 retrogenes
retro_eeur_128, retro_eeur_707,
Echinops telfairi ENSETEG00000001724 ortholog_one2one 1 retrogene
retro_etel_1304,
Mustela putorius furo ENSMPUG00000010533 ortholog_one2many 1 retrogene
retro_mputfur_149,
Mus musculus ENSMUSG00000033845 ortholog_one2one 2 retrogenes
retro_mmus_1709, retro_mmus_3534,
Ornithorhynchus anatinus ENSOANG00000007286 ortholog_one2one 1 retrogene
retro_oana_114,
Otolemur garnettii ENSOGAG00000003768 ortholog_one2one 1 retrogene
retro_ogar_534,
Ochotona princeps ENSOPRG00000000921 ortholog_one2one 2 retrogenes
retro_opri_241, retro_opri_364,
Sus scrofa ENSSSCG00000030578 ortholog_one2one 1 retrogene
retro_sscr_617,
Tarsius syrichta ENSTSYG00000014106 ortholog_one2many 1 retrogene
retro_tsyr_37,
Tursiops truncatus ENSTTRG00000011844 ortholog_one2one 2 retrogenes
retro_ttru_1139, retro_ttru_733,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_1344 58.94 99.51
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2. retro_rnor_2785 65.38 61.95
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Download FASTA sequences of all ENSRNOG00000008566 retrocopies