Parental gene:

MRPL15, ENSDNOG00000017664

Aliases:None
Description:mitochondrial ribosomal protein L15 [Source:HGNC Symbol;Acc:14054]
Organism:Armadillo (Dasypus novemcinctus)
Coordinates:GeneScaffold_3373:65701..76750(+)


>ENSDNOG00000017664
GAGAGAAGACCAAGGGGTCGGAGAAGAGGTAGGAAATGTGGCAGAGGCCATAAAGGAGAAAGGCAGAGAGGTACCCGGCC
TCGATTGGGCTTTGAGGGAGGTCAGACTCCATTTTACATCCGAATCCCAAAATATGGGTTTAATGAAGGGCACAGCTTCA
GGCGCCAGTATCAGCCTTTGAGTCTCAATAGACTGCAGTATCTTATCGATTTGGGTCGAGTTGATCCAACTCAACCGATC
GACTTAACCCAGCTTGTCAATGGGAGAGGTGTGACCATCCAGCCGCTTAAAAGGGATTATGGTGTCCAGCTTGTAGAGGA
GGGGGCTGACACCTTTAAGGCTAAAGTGAATATTGAAGTCCAGCTGGCTTCAGAACTAGCCATTGCTGCAATTGAAAAAA
ATGGTGGCGTCGTTACGACCGCCTTCTATGATCCAAGAAGTCTGGATATTCTGTGCAAGCCTGTTCTGTTCTTTTTGCGT
GGACAACCCATTCCAAAACGCATGCTTCCACCTGAATGCCTGGTGCCCTATTATACTGACGCAAAGAACCGTGGTTACCT
GGCAGATCCTGGCAAATTTCCTGAAGCAAGACTTGAGCTCGCCAAGAAGTATGGTTATGTCTTACCTGATATCACCAAAG
ATGAGCTCTTCAAAATGCTCAGCACCCGAAAGGACCCAAGGCAGATTTTCTTTGGTCTTGCTCCAGGGTGGGTGGTGAAT
ATGGCTGATAAGAAAATCTTAAAGCCTACAGATGAGAATCTCCTCAAGTACTACAGCTCATGA

Library Parental gene expression (RPM)
SRP012922_ascending_colon 41 .42 RPM
SRP012922_cerebellum 25 .57 RPM
SRP012922_heart 31 .32 RPM
SRP012922_kidney 52 .57 RPM
SRP012922_liver 45 .67 RPM
SRP012922_lung 37 .42 RPM
SRP012922_quadricep_muscle 57 .98 RPM
SRP012922_spleen 44 .64 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000001174 ortholog_one2one 1 retrogene
retro_btau_324,
Canis familiaris ENSCAFG00000006988 ortholog_one2one 2 retrogenes
retro_cfam_1573, retro_cfam_511,
Choloepus hoffmanni ENSCHOG00000005299 ortholog_one2one 3 retrogenes
retro_chof_1379, retro_chof_1719, retro_chof_746,
Callithrix jacchus ENSCJAG00000016719 ortholog_one2one 1 retrogene
retro_cjac_2230,
Erinaceus europaeus ENSEEUG00000001454 ortholog_one2one 2 retrogenes
retro_eeur_128, retro_eeur_707,
Echinops telfairi ENSETEG00000001724 ortholog_one2one 1 retrogene
retro_etel_1304,
Mustela putorius furo ENSMPUG00000010533 ortholog_one2many 1 retrogene
retro_mputfur_149,
Mus musculus ENSMUSG00000033845 ortholog_one2one 2 retrogenes
retro_mmus_1709, retro_mmus_3534,
Ornithorhynchus anatinus ENSOANG00000007286 ortholog_one2one 1 retrogene
retro_oana_114,
Otolemur garnettii ENSOGAG00000003768 ortholog_one2one 1 retrogene
retro_ogar_534,
Ochotona princeps ENSOPRG00000000921 ortholog_one2one 2 retrogenes
retro_opri_241, retro_opri_364,
Rattus norvegicus ENSRNOG00000008566 ortholog_one2one 2 retrogenes
retro_rnor_1344, retro_rnor_2785,
Sus scrofa ENSSSCG00000030578 ortholog_one2one 1 retrogene
retro_sscr_617,
Tarsius syrichta ENSTSYG00000014106 ortholog_one2many 1 retrogene
retro_tsyr_37,
Tursiops truncatus ENSTTRG00000011844 ortholog_one2one 2 retrogenes
retro_ttru_1139, retro_ttru_733,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_dnov_364 91.22 56.92
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Download FASTA sequences of all ENSDNOG00000017664 retrocopies