Parental gene:

MRPL15, ENSBTAG00000001174

Aliases:None
Description:39S ribosomal protein L15, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q0VC21]
Organism:Cow (Bos taurus)
Coordinates:14:23675382..23680928(+)


>ENSBTAG00000001174
ATGGCCGGCCCGGTGCGGGGCGCAGCAGGGCCTTGGGCCCTGGACTTGCTTCGGGCCCTGCCTCGTGTGAGCCTGGCTAA
CCTGAGGCCGAACCCGGGCTCCAGGAAACCGGAAAGACGACGAAGAGGTCAGAGAAGAGGTAGGAAGTGTGGCAGGGGCC
ACAAAGGAGAACGGCAGAGAGGAACCCGGCCCCGGCTGGGCTTTGAAGGAGGCCAGACTCCATTTTACCTTCGAATCCCA
AAATATGGCTTTAATGAAGGACACAGCTTCAGACGCCAGTATCAGCCTTTGAGTCTCAACAGGCTGCAGTACCTGATTGA
CCTGGGCCGTGTCGATCCCACACAACCTATTGACTTAACCCAGCTGGTCAACGGGCGAGGTGTTACCATCCAGCCATCTA
AAAGGGACTATGGAGTCCAGTTGGTAGAGGAGGGCGCTGACACCTTTAAGGCAAAAGTTAACATCGAAGTTCAGCTGGCT
TCTGAGCTGGCCATCGCCGCCATCGAGAAGAACGGGGGTGTCGTCACGACCGCCTTCTACGACCCGAGAAGCCTGGAAAT
TCTGTGCAAACCCATCCCATTCTTTCTCCGTGGACAACCCATTCCCAAGCGGATGCTCCCCCCCGAGGCCCTAGTCCCCT
ACTACACTGACGCGAGAAATCGAGGCTATCTGGCAGATCCTGCCAGATTTCCCGAAGCAAGACTGGAGCTCGCCAAGAAG
TATGGCTATATTTTACCTGACATCACTAAAGACGAACTCTTCAAAATGCTCAGTTCTCGGAAGGATCCACGGCAGATTTT
CTTTGGTCTGGCTCCCGGATGGGTGGTGAACATGGCAGACAAGAAGATTCTGAAACCTACGGATGAGAAGCTGCTTGAGT
ACTACAGCTCCTGA

Library Parental gene expression (RPM)
SRP017611_brain 22 .06 RPM
SRP017611_kidney 21 .04 RPM
SRP017611_liver 23 .71 RPM
ERP005899_muscle 25 .02 RPM
ERP005899_liver 18 .24 RPM
SRP030211_testis 36 .24 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000006988 ortholog_one2one 2 retrogenes
retro_cfam_1573, retro_cfam_511,
Choloepus hoffmanni ENSCHOG00000005299 ortholog_one2one 3 retrogenes
retro_chof_1379, retro_chof_1719, retro_chof_746,
Callithrix jacchus ENSCJAG00000016719 ortholog_one2one 1 retrogene
retro_cjac_2230,
Dasypus novemcinctus ENSDNOG00000017664 ortholog_one2one 1 retrogene
retro_dnov_364,
Erinaceus europaeus ENSEEUG00000001454 ortholog_one2one 2 retrogenes
retro_eeur_128, retro_eeur_707,
Echinops telfairi ENSETEG00000001724 ortholog_one2one 1 retrogene
retro_etel_1304,
Mustela putorius furo ENSMPUG00000010533 ortholog_one2many 1 retrogene
retro_mputfur_149,
Mus musculus ENSMUSG00000033845 ortholog_one2one 2 retrogenes
retro_mmus_1709, retro_mmus_3534,
Ornithorhynchus anatinus ENSOANG00000007286 ortholog_one2one 1 retrogene
retro_oana_114,
Otolemur garnettii ENSOGAG00000003768 ortholog_one2one 1 retrogene
retro_ogar_534,
Ochotona princeps ENSOPRG00000000921 ortholog_one2one 2 retrogenes
retro_opri_241, retro_opri_364,
Rattus norvegicus ENSRNOG00000008566 ortholog_one2one 2 retrogenes
retro_rnor_1344, retro_rnor_2785,
Sus scrofa ENSSSCG00000030578 ortholog_one2one 1 retrogene
retro_sscr_617,
Tarsius syrichta ENSTSYG00000014106 ortholog_one2many 1 retrogene
retro_tsyr_37,
Tursiops truncatus ENSTTRG00000011844 ortholog_one2one 2 retrogenes
retro_ttru_1139, retro_ttru_733,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_324 96.98 100.00
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Download FASTA sequences of all ENSBTAG00000001174 retrocopies