Parental gene: | DNAJC7, ENSPTRG00000009188 |
| Aliases: | None |
| Description: | None |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 17:15382200..15424871(+) |
>ENSPTRG00000009188
ATGGCGGCTGCCGCGGAGTGCGATGTGGTAATGGCGGCGACCGAGCCAGAGCTGCTCGACGACCAAGAGGCGAAGAGGGA
AGCAGAGACTTTCAAGGAACAAGGAAATGCATACTATGCCAAGAAAGATTACAATGAAGCTTATAATTATTACACAAAAG
CCATAGATATGTGTCCTAAAAATGCTAGCTATTATGGTAATCGAGCAGCCACCTTGATGATGCTTGGAAGGTTCCGGGAA
GCTCTTGGAGATGCACAACAGTCAGTGAGGTTGGATGACAGTTTTGTCCGGGGACATCTACGAGAGGGCAAGTGCCACCT
CTCTCTGGGGAATGCCATGGCAGCATGTCGCAGCTTCCAGAGAGCCCTAGAACTGGATCATAAAAATGCTCAGGCACAAC
AAGAGTTCAAGAATGCTAATGCAGTCATGGAATATGAGAAAATAGCAGAAACAGATTTTGAGAAGCGAGATTTTCGGAAG
GTTGTTTTCTGCATGGACCGTGCCCTAGAATTTGCCCCTGCCTGCCATCGCTTCAAAATCCTCAAGGCAGAATGTTTAGC
AATGCTGGGTCGTTATCCAGAAGCACAGTCTGTGGCTAGTGACATTCTACGAATGGATTCCACCAATGCAGATGCTCTGT
ATGTACGAGGTCTTTGCCTTTATTACGAAGATTGTATTGAGAAGGCAGTTCAGTTTTTCGTACAGGCTCTCAGGATGGCT
CCTGACCACGAGAAGGCCTGCATTGCCTGCAGAAATGCCAAAGCACTCAAAGCAAAGAAAGAAGATGGGAATAAAGCATT
TAAGGAAGGAAATTACAAACTAGCATATGAACTGTACACAGAAGCCCTGGGGATAGACCCCAACAATATAAAAACAAATG
CTAAACTCTACTGTAATCGGGGTACGGTTAATTCCAAGCTTAGGAAACTAGATGATGCAATAGAAGACTGCACAAATGCA
GTGAAGCTTGATGACACTTACATAAAAGCCTACTTGAGAAGAGCTCAGTGTTACATGGACACAGAACAGTATGAAGAAGC
AGTACGAGACTATGAAAAAGTATATCAGACAGAGAAAACAAAAGAACACAAACAGCTCCTAAAAAATGCGCAGCTGGAAC
TGAAGAAGAGTAAGAGGAAAGATTACTACAAGATTCTAGGAGTGGACAAGAATGCCTCTGAGGACGAGATCAAGAAAGCT
TATCGGAAACGGGCCTTGATGCACCATCCAGATCGGCATAGTGGAGCCAGTGCTGAGGTTCAGAAGGAGGAGGAGAAGAA
GTTCAAGGAAGTTGGAGAGGCCTTTACTATCCTCTCTGATCCCAAGAAAAAGACTCGCTATGACAGTGGACAGGACCTAG
ATGAGGAGGGCATGAATATGGGTGATTTTGATCCAAACAGTATCTTCAAGGCATTCTTTGGCGGTCCTGGCGGCTTCAGC
TTTGAAGCATCTGGTCCAGGGAATTTCTTTTTTCAATTTGGCTAA
ATGGCGGCTGCCGCGGAGTGCGATGTGGTAATGGCGGCGACCGAGCCAGAGCTGCTCGACGACCAAGAGGCGAAGAGGGA
AGCAGAGACTTTCAAGGAACAAGGAAATGCATACTATGCCAAGAAAGATTACAATGAAGCTTATAATTATTACACAAAAG
CCATAGATATGTGTCCTAAAAATGCTAGCTATTATGGTAATCGAGCAGCCACCTTGATGATGCTTGGAAGGTTCCGGGAA
GCTCTTGGAGATGCACAACAGTCAGTGAGGTTGGATGACAGTTTTGTCCGGGGACATCTACGAGAGGGCAAGTGCCACCT
CTCTCTGGGGAATGCCATGGCAGCATGTCGCAGCTTCCAGAGAGCCCTAGAACTGGATCATAAAAATGCTCAGGCACAAC
AAGAGTTCAAGAATGCTAATGCAGTCATGGAATATGAGAAAATAGCAGAAACAGATTTTGAGAAGCGAGATTTTCGGAAG
GTTGTTTTCTGCATGGACCGTGCCCTAGAATTTGCCCCTGCCTGCCATCGCTTCAAAATCCTCAAGGCAGAATGTTTAGC
AATGCTGGGTCGTTATCCAGAAGCACAGTCTGTGGCTAGTGACATTCTACGAATGGATTCCACCAATGCAGATGCTCTGT
ATGTACGAGGTCTTTGCCTTTATTACGAAGATTGTATTGAGAAGGCAGTTCAGTTTTTCGTACAGGCTCTCAGGATGGCT
CCTGACCACGAGAAGGCCTGCATTGCCTGCAGAAATGCCAAAGCACTCAAAGCAAAGAAAGAAGATGGGAATAAAGCATT
TAAGGAAGGAAATTACAAACTAGCATATGAACTGTACACAGAAGCCCTGGGGATAGACCCCAACAATATAAAAACAAATG
CTAAACTCTACTGTAATCGGGGTACGGTTAATTCCAAGCTTAGGAAACTAGATGATGCAATAGAAGACTGCACAAATGCA
GTGAAGCTTGATGACACTTACATAAAAGCCTACTTGAGAAGAGCTCAGTGTTACATGGACACAGAACAGTATGAAGAAGC
AGTACGAGACTATGAAAAAGTATATCAGACAGAGAAAACAAAAGAACACAAACAGCTCCTAAAAAATGCGCAGCTGGAAC
TGAAGAAGAGTAAGAGGAAAGATTACTACAAGATTCTAGGAGTGGACAAGAATGCCTCTGAGGACGAGATCAAGAAAGCT
TATCGGAAACGGGCCTTGATGCACCATCCAGATCGGCATAGTGGAGCCAGTGCTGAGGTTCAGAAGGAGGAGGAGAAGAA
GTTCAAGGAAGTTGGAGAGGCCTTTACTATCCTCTCTGATCCCAAGAAAAAGACTCGCTATGACAGTGGACAGGACCTAG
ATGAGGAGGGCATGAATATGGGTGATTTTGATCCAAACAGTATCTTCAAGGCATTCTTTGGCGGTCCTGGCGGCTTCAGC
TTTGAAGCATCTGGTCCAGGGAATTTCTTTTTTCAATTTGGCTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 50 .48 RPM |
| SRP007412_cerebellum | 49 .69 RPM |
| SRP007412_heart | 53 .28 RPM |
| SRP007412_kidney | 45 .35 RPM |
| SRP007412_liver | 33 .03 RPM |
| SRP007412_testis | 70 .71 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000015749 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000035699 | ortholog_one2one | 2 retrogenes | |
| Homo sapiens | ENSG00000168259 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000010230 | ortholog_one2one | 2 retrogenes | |
| Myotis lucifugus | ENSMLUG00000011968 | ortholog_one2one | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000016118 | ortholog_one2one | 3 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000011230 | ortholog_one2one | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000008402 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_304 | 80.05 | 75.51 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ptro_2393 | 74.89 | 94.74 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000009188 retrocopies