Parental gene: | DNAJC7, ENSCJAG00000035699 |
| Aliases: | None |
| Description: | None |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 5:113570491..113608388(-) |
>ENSCJAG00000035699
ATGGCGGCTGCCGCGGAATGCGATGTGGTAATGGCGGCGACCGAGCCAGAGCTGCTGGACGACGAAGAGGCGAAGAGGGA
AGCAGAGACTTTCAAGGAACAAGGAAATGCATACTATGCCAAGAAAGATTACAATGAAGCTTACAATTATTATACAAAAG
CCATAGATATGTGTCCTAAAAATGCTAGCTATTATGGTAATCGAGCAGCCACCTTGATGATGCTTGGAAGGTTCCGGGAA
GCTCTCGGAGATGCGCAACAGTCAGTGAGATTGGATGACAGTTTTGTCCGGGGACATCTGCGAGAAGGCAAGTGCCACCT
CTCTCTAGGGAATGCCATGGCAGCATGTCGCAGTTTCCAGAGAGCCCTAGAACTGGATCATAAAAATGCTCAGGCCCAGC
AAGAGTTCAAGAATGCTAATGCAGTCATGGAATATGAGAAAATAGCAGAAACAGATTTTGAGAAGCGAGATTTTCGGAAG
GTTGTTTTCTGCATGGACCGTGCCCTAGAATTTGCCCCTGCCTGCCATCGCTTCAAAATCCTCAAGGCAGAATGTTTAGC
AATGCTGGGTCGTTATCCGGAAGCACAGTCTGTGGCTAGTGACATTCTACGAATGGATTCCACCAATGCAGATGCTCTGT
ATGTACGAGGTCTTTGCCTTTATTATGAAGATTGTATCGAGAAGGCAGTTCAGTTTTTTGTACAGGCTCTCAGGATGGCC
CCTGACCATGAGAAGGCCTGCATTGCCTGCAGAAATGCCAAAGCACTTAAAGCAAAGAAAGAAGATGGAAATAAAGCATT
TAAGGAAGGAAATTACAAACTAGCGTATGAACTGTACACAGAAGCCCTGGGGATAGACCCCAACAATATAAAAACAAATG
CTAAACTCTACTGTAATCGGGGTACGGTTAATTCCAAGCTTAGGAAACTAGATGATGCAATAGAAGACTGCACAAATGCA
GTGAAGCTTGATGACACTTACATAAAAGCCTACTTGAGAAGAGCTCAGTGTTACATGGACACAGAACAGTATGAAGAAGC
AGTACGAGACTATGAAAAAGTATATCAGACGGAGAAAACAAAAGAACACAAACAGCTCCTAAAAAATGCACAGCTGGAAC
TGAAGAAGAGTAAGAGGAAAGATTACTACAAGATTCTGGGAGTGGACAAGAATGCCTCTGAGGACGAGATCAAGAAAGCT
TATCGGAAACGGGCCTTAATGCACCATCCAGATCGGCATAGTGGAGCCAGTGCTGAGGTTCAGAAGGAGGAGGAGAAGAA
GTTCAAGGAAGTTGGAGAAGCCTTTACCATCCTCTCTGATCCCAAGAAAAAAACTCGCTATGACAGTGGACAGGACCTGG
ATGAGGAGGGCATGAATATGGGTGATTTTGATGCAAACAATATCTTCAAGGCATTCTTCGGCGGTCCTGGGGGCTTTAGC
TTTGAAGCATCTGGTCCAGGGAATTTCTTTTTTCAGTTTGGCTAA
ATGGCGGCTGCCGCGGAATGCGATGTGGTAATGGCGGCGACCGAGCCAGAGCTGCTGGACGACGAAGAGGCGAAGAGGGA
AGCAGAGACTTTCAAGGAACAAGGAAATGCATACTATGCCAAGAAAGATTACAATGAAGCTTACAATTATTATACAAAAG
CCATAGATATGTGTCCTAAAAATGCTAGCTATTATGGTAATCGAGCAGCCACCTTGATGATGCTTGGAAGGTTCCGGGAA
GCTCTCGGAGATGCGCAACAGTCAGTGAGATTGGATGACAGTTTTGTCCGGGGACATCTGCGAGAAGGCAAGTGCCACCT
CTCTCTAGGGAATGCCATGGCAGCATGTCGCAGTTTCCAGAGAGCCCTAGAACTGGATCATAAAAATGCTCAGGCCCAGC
AAGAGTTCAAGAATGCTAATGCAGTCATGGAATATGAGAAAATAGCAGAAACAGATTTTGAGAAGCGAGATTTTCGGAAG
GTTGTTTTCTGCATGGACCGTGCCCTAGAATTTGCCCCTGCCTGCCATCGCTTCAAAATCCTCAAGGCAGAATGTTTAGC
AATGCTGGGTCGTTATCCGGAAGCACAGTCTGTGGCTAGTGACATTCTACGAATGGATTCCACCAATGCAGATGCTCTGT
ATGTACGAGGTCTTTGCCTTTATTATGAAGATTGTATCGAGAAGGCAGTTCAGTTTTTTGTACAGGCTCTCAGGATGGCC
CCTGACCATGAGAAGGCCTGCATTGCCTGCAGAAATGCCAAAGCACTTAAAGCAAAGAAAGAAGATGGAAATAAAGCATT
TAAGGAAGGAAATTACAAACTAGCGTATGAACTGTACACAGAAGCCCTGGGGATAGACCCCAACAATATAAAAACAAATG
CTAAACTCTACTGTAATCGGGGTACGGTTAATTCCAAGCTTAGGAAACTAGATGATGCAATAGAAGACTGCACAAATGCA
GTGAAGCTTGATGACACTTACATAAAAGCCTACTTGAGAAGAGCTCAGTGTTACATGGACACAGAACAGTATGAAGAAGC
AGTACGAGACTATGAAAAAGTATATCAGACGGAGAAAACAAAAGAACACAAACAGCTCCTAAAAAATGCACAGCTGGAAC
TGAAGAAGAGTAAGAGGAAAGATTACTACAAGATTCTGGGAGTGGACAAGAATGCCTCTGAGGACGAGATCAAGAAAGCT
TATCGGAAACGGGCCTTAATGCACCATCCAGATCGGCATAGTGGAGCCAGTGCTGAGGTTCAGAAGGAGGAGGAGAAGAA
GTTCAAGGAAGTTGGAGAAGCCTTTACCATCCTCTCTGATCCCAAGAAAAAAACTCGCTATGACAGTGGACAGGACCTGG
ATGAGGAGGGCATGAATATGGGTGATTTTGATGCAAACAATATCTTCAAGGCATTCTTCGGCGGTCCTGGGGGCTTTAGC
TTTGAAGCATCTGGTCCAGGGAATTTCTTTTTTCAGTTTGGCTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 27 .33 RPM |
| SRP051959_skeletal_muscle | 26 .88 RPM |
| SRP051959_lymph_node | 27 .42 RPM |
| SRP051959_lung | 27 .20 RPM |
| SRP051959_liver | 20 .97 RPM |
| SRP051959_kidney | 29 .57 RPM |
| SRP051959_heart | 22 .03 RPM |
| SRP051959_colon | 21 .57 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000015749 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000168259 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000010230 | ortholog_one2one | 2 retrogenes | |
| Myotis lucifugus | ENSMLUG00000011968 | ortholog_one2one | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000016118 | ortholog_one2one | 3 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000011230 | ortholog_one2one | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000008402 | ortholog_one2one | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000009188 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_2381 | 67.25 | 63.70 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cjac_2475 | 83.79 | 90.64 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000035699 retrocopies