Parental gene: | DNAJC7, ENSPPYG00000008402 |
| Aliases: | None |
| Description: | dnaJ homolog subfamily C member 7 [Source:RefSeq peptide;Acc:NP_001126143] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 17:47432522..47474247(+) |
>ENSPPYG00000008402
ATGGCGGCTGCCGCGGAGTGCGATGTGGTAATGGCGGCGACCGAGCCAGAGCTGCTCGACGACCAAGAGGCGAAGAGGGA
AGCAGAGACTTTCAAGGAACAAGGAAATGCATACTATGCCAAGAAAGATTACAATGAAGCTTATAATTATTATACAAAAG
CCATAGATATGTGTCCTAAAAATGCTAGCTATTATGGTAATCGAGCAGCCACCTTGATGATGCTTGGAAGGTTCCGGGAA
GCTCTTGGAGATGCACAACAGTCAGTGAGGTTGGATGACAGTTTTGTCCGGGGACATCTACGAGAGGGCAAGTGCCACCT
CTCTCTAGGGAATGCCATGGCAGCATGTCGCAGCTTCCAGAGAGCCCTAGAACTGGATCATAAAAATGCTCAGGCACAAC
AAGAGTTCAAGAATGCTAATGCAGTCATGGAATATGAGAAAATAGCAGAAACAGATTTTGAGAAGCGAGATTTTCGGAAG
GTTGTTTTCTGCATGGACCGTGCCCTAGAATTTGCCCCTGCCTGCCATCGCTTCAAAATCCTCAAGGCAGAATGTTTAGC
AATGCTGGGTCGTTATCCAGAAGCACAGTCTGTGGCTAGTGACATTCTACGAATGGATTCCACCAATGCAGATGCTCTGT
ATGTACGAGGTCTTTGCCTTTATTACGAAGATTGTATTGAGAAGGCAGTTCAGTTTTTCGTACAGGCTCTCAGGATGGCT
CCTGACCACGAGAAGGCCTGCATTGCCTGCAGAAATGCCAAAGCACTCAAAGCAAAGAAGGAAGATGGGAATAAAGCATT
TAAGGAAGGAAATTACAAACTAGCATATGAACTGTACACAGAAGCCCTGGGGATAGACCCCAACAATATAAAAACAAATG
CTAAACTCTACTGTAATCGGGGTACGGTTAATTCCAAGCTTAGGAAACTAGATGATGCAATAGAAGACTGCACAAATGCA
GTGAAGCTTGATGACACTTACATAAAAGCCTACTTGAGAAGAGCTCAGTGTTACATGGACACAGAACAGTATGAAGAAGC
AGTACGAGACTATGAAAAAGTATATCAGACAGAGAAAACAAAAGAACACAAACAGCTCCTAAAAAATGCGCAGCTGGAAC
TGAAGAAGAGTAAGAGGAAAGATTACTACAAGATTCTAGGAGTGGACAAGAATGCCTCTGAGGACGAGATCAAGAAAGCT
TATCGGAAACGGGCCTTGATGCACCATCCAGATCGGCATAGTGGAGCCAGTGCTGAGGTTCAGAAGGAGGAAGAGAAGAA
GTTCAAGGAAGTTGGAGAGGCCTTTACTATCCTCTCTGATCCCAAGAAAAAGACTCGCTATGACAGTGGACAGGACCTAG
ATGAGGAGGGCATGAATATGGGTGATTTTGATCCAAACAATATCTTCAAGGCATTCTTTGGCGGTCCTGGCGGCTTCAGC
TTTGAAGCATCTGGTCCAGGGAATTTCTTTTTTCAATTTGGCTAA
ATGGCGGCTGCCGCGGAGTGCGATGTGGTAATGGCGGCGACCGAGCCAGAGCTGCTCGACGACCAAGAGGCGAAGAGGGA
AGCAGAGACTTTCAAGGAACAAGGAAATGCATACTATGCCAAGAAAGATTACAATGAAGCTTATAATTATTATACAAAAG
CCATAGATATGTGTCCTAAAAATGCTAGCTATTATGGTAATCGAGCAGCCACCTTGATGATGCTTGGAAGGTTCCGGGAA
GCTCTTGGAGATGCACAACAGTCAGTGAGGTTGGATGACAGTTTTGTCCGGGGACATCTACGAGAGGGCAAGTGCCACCT
CTCTCTAGGGAATGCCATGGCAGCATGTCGCAGCTTCCAGAGAGCCCTAGAACTGGATCATAAAAATGCTCAGGCACAAC
AAGAGTTCAAGAATGCTAATGCAGTCATGGAATATGAGAAAATAGCAGAAACAGATTTTGAGAAGCGAGATTTTCGGAAG
GTTGTTTTCTGCATGGACCGTGCCCTAGAATTTGCCCCTGCCTGCCATCGCTTCAAAATCCTCAAGGCAGAATGTTTAGC
AATGCTGGGTCGTTATCCAGAAGCACAGTCTGTGGCTAGTGACATTCTACGAATGGATTCCACCAATGCAGATGCTCTGT
ATGTACGAGGTCTTTGCCTTTATTACGAAGATTGTATTGAGAAGGCAGTTCAGTTTTTCGTACAGGCTCTCAGGATGGCT
CCTGACCACGAGAAGGCCTGCATTGCCTGCAGAAATGCCAAAGCACTCAAAGCAAAGAAGGAAGATGGGAATAAAGCATT
TAAGGAAGGAAATTACAAACTAGCATATGAACTGTACACAGAAGCCCTGGGGATAGACCCCAACAATATAAAAACAAATG
CTAAACTCTACTGTAATCGGGGTACGGTTAATTCCAAGCTTAGGAAACTAGATGATGCAATAGAAGACTGCACAAATGCA
GTGAAGCTTGATGACACTTACATAAAAGCCTACTTGAGAAGAGCTCAGTGTTACATGGACACAGAACAGTATGAAGAAGC
AGTACGAGACTATGAAAAAGTATATCAGACAGAGAAAACAAAAGAACACAAACAGCTCCTAAAAAATGCGCAGCTGGAAC
TGAAGAAGAGTAAGAGGAAAGATTACTACAAGATTCTAGGAGTGGACAAGAATGCCTCTGAGGACGAGATCAAGAAAGCT
TATCGGAAACGGGCCTTGATGCACCATCCAGATCGGCATAGTGGAGCCAGTGCTGAGGTTCAGAAGGAGGAAGAGAAGAA
GTTCAAGGAAGTTGGAGAGGCCTTTACTATCCTCTCTGATCCCAAGAAAAAGACTCGCTATGACAGTGGACAGGACCTAG
ATGAGGAGGGCATGAATATGGGTGATTTTGATCCAAACAATATCTTCAAGGCATTCTTTGGCGGTCCTGGCGGCTTCAGC
TTTGAAGCATCTGGTCCAGGGAATTTCTTTTTTCAATTTGGCTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 72 .04 RPM |
| SRP007412_cerebellum | 61 .89 RPM |
| SRP007412_heart | 16 .44 RPM |
| SRP007412_kidney | 43 .65 RPM |
| SRP007412_liver | 23 .62 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000015749 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000035699 | ortholog_one2one | 2 retrogenes | |
| Homo sapiens | ENSG00000168259 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000010230 | ortholog_one2one | 2 retrogenes | |
| Myotis lucifugus | ENSMLUG00000011968 | ortholog_one2one | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000016118 | ortholog_one2one | 3 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000011230 | ortholog_one2one | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000009188 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_317 | 80.00 | 50.20 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pabe_2911 | 78.44 | 94.33 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000008402 retrocopies