Parental gene: | MMU.10030, ENSMMUG00000016118 |
| Aliases: | None |
| Description: | dnaJ homolog subfamily C member 7 [Source:RefSeq peptide;Acc:NP_001248180] |
| Organism: | Rhesus macaque (Macaca mulatta) |
| Coordinates: | 16:52083774..52125934(-) |
>ENSMMUG00000016118
ATGGCGGCTGCCGCGGAGTGCGATGTGGTAATGGCGGCGACCGAGCCAGAGCTGCTCGACGACGAAGAGGCGAAGAGGGA
AGCAGAGACTTTCAAGGAACAAGGAAATGCATACTATGCCAAGAAAGATTACAATGAAGCTTATAATTATTATACAAAAG
CCATAGATATGTGTCCTAAAAATGCTAGCTATTATGGTAATCGAGCAGCCACCTTGATGATGCTTGGAAGGTTCCGGGAA
GCTCTCGGAGATGCACAACAGTCAGTGAGGTTGGATGACAGTTTTGTCCGGGGACATCTACGAGAGGGCAAGTGCCATCT
CTCTCTAGGAAATGCCATGGCAGCATGTCGCAGCTTCCAGAGAGCCCTAGAACTGGATCATAAAAATGCTCAGGCACAAC
AAGAGTTCAAGAATGCTAATGCAGTCATGGAATATGAGAAAATAGCAGAAACAGATTTTGAGAAGCGAGATTTTCGGAAG
GTTGTTTTCTGCATGGACCGTGCCCTAGAATTTGCCCCTGCCTGCCATCGCTTCAAAATCCTCAAGGCAGAATGTTTAGC
AATGCTGGGTCGTTATCCAGAAGCACAGTCTGTGGCTAGTGACATTCTACGAATGGATTCTACCAATGCAGATGCTCTAT
ATGTACGAGGTCTTTGCCTTTATTATGAAGATTGTATTGAGAAGGCAGTTCAGTTTTTCGTACAGGCTCTCAGGATGGCT
CCTGACCATGAGAAAGCCTGCATTGCCTGCAGAAATGCCAAAGCACTCAAAGCAAAGAAAGAAGATGGGAATAAAGCATT
TAAGGAAGGAAATTACAAACTAGCATATGAACTGTACACAGAAGCCCTGGGGATAGACCCCAACAATATAAAAACAAATG
CTAAACTCTACTGTAATCGGGGTACGGTTAATTCCAAGCTTAGGAAACTAGATGATGCAATAGAAGACTGCACAAATGCA
GTGAAGCTTGATGACACTTACATAAAAGCCTACTTGAGAAGAGCCCAGTGTTACATGGACACAGAACAGTATGAAGAAGC
AGTACGAGACTATGAAAAAGTGTATCAGACGGAGAAAACAAAAGAACACAAACAGCTCCTAAAAAATGCACAGCTGGAAC
TGAAGAAGAGTAAGAGGAAAGATTACTACAAGATTCTGGGAGTGGACAAGAATGCCTCTGAGGACGAGATCAAGAAAGCT
TATCGGAAACGGGCCTTGATGCACCATCCAGATCGGCATAGTGGAGCCAGTGCTGAGGTTCAGAAGGAGGAGGAGAAGAA
GTTCAAGGAAGTTGGAGAGGCCTTTACTATCCTCTCTGATCCCAAGAAAAAGACTCGCTATGACAGTGGACAGGACCTAG
ATGAGGAGGGCATGAATATGGGTGATTTTGATCCAAACAATATCTTCAAGGCTTTCTTCGGCGGTCCTGGAGGCTTCAGC
TTTGAAGCATCTGGTCCAGGGAGTTTCTTTTTTCAATTTGGCTAA
ATGGCGGCTGCCGCGGAGTGCGATGTGGTAATGGCGGCGACCGAGCCAGAGCTGCTCGACGACGAAGAGGCGAAGAGGGA
AGCAGAGACTTTCAAGGAACAAGGAAATGCATACTATGCCAAGAAAGATTACAATGAAGCTTATAATTATTATACAAAAG
CCATAGATATGTGTCCTAAAAATGCTAGCTATTATGGTAATCGAGCAGCCACCTTGATGATGCTTGGAAGGTTCCGGGAA
GCTCTCGGAGATGCACAACAGTCAGTGAGGTTGGATGACAGTTTTGTCCGGGGACATCTACGAGAGGGCAAGTGCCATCT
CTCTCTAGGAAATGCCATGGCAGCATGTCGCAGCTTCCAGAGAGCCCTAGAACTGGATCATAAAAATGCTCAGGCACAAC
AAGAGTTCAAGAATGCTAATGCAGTCATGGAATATGAGAAAATAGCAGAAACAGATTTTGAGAAGCGAGATTTTCGGAAG
GTTGTTTTCTGCATGGACCGTGCCCTAGAATTTGCCCCTGCCTGCCATCGCTTCAAAATCCTCAAGGCAGAATGTTTAGC
AATGCTGGGTCGTTATCCAGAAGCACAGTCTGTGGCTAGTGACATTCTACGAATGGATTCTACCAATGCAGATGCTCTAT
ATGTACGAGGTCTTTGCCTTTATTATGAAGATTGTATTGAGAAGGCAGTTCAGTTTTTCGTACAGGCTCTCAGGATGGCT
CCTGACCATGAGAAAGCCTGCATTGCCTGCAGAAATGCCAAAGCACTCAAAGCAAAGAAAGAAGATGGGAATAAAGCATT
TAAGGAAGGAAATTACAAACTAGCATATGAACTGTACACAGAAGCCCTGGGGATAGACCCCAACAATATAAAAACAAATG
CTAAACTCTACTGTAATCGGGGTACGGTTAATTCCAAGCTTAGGAAACTAGATGATGCAATAGAAGACTGCACAAATGCA
GTGAAGCTTGATGACACTTACATAAAAGCCTACTTGAGAAGAGCCCAGTGTTACATGGACACAGAACAGTATGAAGAAGC
AGTACGAGACTATGAAAAAGTGTATCAGACGGAGAAAACAAAAGAACACAAACAGCTCCTAAAAAATGCACAGCTGGAAC
TGAAGAAGAGTAAGAGGAAAGATTACTACAAGATTCTGGGAGTGGACAAGAATGCCTCTGAGGACGAGATCAAGAAAGCT
TATCGGAAACGGGCCTTGATGCACCATCCAGATCGGCATAGTGGAGCCAGTGCTGAGGTTCAGAAGGAGGAGGAGAAGAA
GTTCAAGGAAGTTGGAGAGGCCTTTACTATCCTCTCTGATCCCAAGAAAAAGACTCGCTATGACAGTGGACAGGACCTAG
ATGAGGAGGGCATGAATATGGGTGATTTTGATCCAAACAATATCTTCAAGGCTTTCTTCGGCGGTCCTGGAGGCTTCAGC
TTTGAAGCATCTGGTCCAGGGAGTTTCTTTTTTCAATTTGGCTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 57 .67 RPM |
| SRP007412_brain | 46 .28 RPM |
| SRP007412_cerebellum | 35 .26 RPM |
| SRP007412_heart | 17 .19 RPM |
| SRP007412_kidney | 20 .66 RPM |
| SRP007412_liver | 4 .95 RPM |
| SRP007412_testis | 30 .76 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000015749 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000035699 | ortholog_one2one | 2 retrogenes | |
| Homo sapiens | ENSG00000168259 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000010230 | ortholog_one2one | 2 retrogenes | |
| Myotis lucifugus | ENSMLUG00000011968 | ortholog_one2one | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000011230 | ortholog_one2one | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000008402 | ortholog_one2one | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000009188 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmul_501 | 72.84 | 93.12 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmul_1084 | 99.39 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_mmul_1854 | 78.42 | 58.30 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMMUG00000016118 retrocopies