Parental gene: | ENSPPYG00000029838 |
| Aliases: | None |
| Description: | None |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 6:34230634..34233471(+) |
>ENSPPYG00000029838
ATGAGCGAGTCGAGCTCGAAGTCCAGCCAGCCTTTGGCCTCCAAGCAGGAAAAGGACGGCACTGAGAAGCGGGGCCGGGG
CAGGCCGCGCAAGCAGCCTCCGGTGAGTCCCGGGACAGCGCTGGTAGGGAGTCAGAAGGAGCCCAGCGAAGTGCCAACAC
CTAAGAGACCTCGGGGCCGACCAAAGGGAAGCAAAAACAAGGGTGCTGCCAAGACCCGGAAAACCACCACAACTCCAGGA
AGGAAACCAAGGGGCAGACCCAAAAAACTGGTAGGTGAAGAAGCAGACTGCTGCTTGCCTCCTGGGCTCTTTTGA
ATGAGCGAGTCGAGCTCGAAGTCCAGCCAGCCTTTGGCCTCCAAGCAGGAAAAGGACGGCACTGAGAAGCGGGGCCGGGG
CAGGCCGCGCAAGCAGCCTCCGGTGAGTCCCGGGACAGCGCTGGTAGGGAGTCAGAAGGAGCCCAGCGAAGTGCCAACAC
CTAAGAGACCTCGGGGCCGACCAAAGGGAAGCAAAAACAAGGGTGCTGCCAAGACCCGGAAAACCACCACAACTCCAGGA
AGGAAACCAAGGGGCAGACCCAAAAAACTGGTAGGTGAAGAAGCAGACTGCTGCTTGCCTCCTGGGCTCTTTTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 4 .15 RPM |
| SRP007412_cerebellum | 0 .97 RPM |
| SRP007412_heart | 0 .51 RPM |
| SRP007412_kidney | 0 .96 RPM |
| SRP007412_liver | 0 .28 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000001061 | possible_ortholog | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000015226 | ortholog_one2many | 2 retrogenes | |
| Homo sapiens | ENSG00000137309 | possible_ortholog | 4 retrogenes | |
| Myotis lucifugus | ENSMLUG00000010085 | possible_ortholog | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000019529 | ortholog_one2many | 2 retrogenes | |
| Mus musculus | ENSMUSG00000046711 | ortholog_many2many | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000008303 | ortholog_one2one | 1 retrogene | |
| Procavia capensis | ENSPCAG00000016076 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000040884 | possible_ortholog | 6 retrogenes | |
| Pteropus vampyrus | ENSPVAG00000014283 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000000488 | ortholog_many2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_960 | 96.70 | 86.54 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pabe_1941 | 91.49 | 90.38 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_pabe_2441 | 84.38 | 92.31 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_pabe_3623 | 78.12 | 92.31 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000029838 retrocopies