Parental gene:

Hmga1, ENSMUSG00000046711

Aliases:Hmga1, AL023995, Hmga1a, Hmga1b, Hmgi, Hmgiy, Hmgy
Description:high mobility group AT-hook 1 [Source:MGI Symbol;Acc:MGI:96160]
Organism:Mouse (Mus musculus)
Coordinates:17:27556619..27563674(+)


>ENSMUSG00000046711
ATGAGCGAGTCGGGCTCAAAGTCCAGCCAGCCCCTGGCCTCCAAGCAGGAAAAGGATGGGACTGAGAAGCGAGGCCGGGG
CAGGCCACGCAAGCAGCCTCCGGTGAGTCCTGGGACGGCGCTGGTCGGGAGTCAGAAAGAGCCCAGTGAAGTGCCAACTC
CGAAGAGACCTCGGGGCCGACCAAAGGGAAGCAAGAATAAGGGCGCCGCCAAGACCCGGAAAGTCACCACAGCTCCAGGG
AGGAAACCAAGGGGCAGACCCAAGAAACTGGAGAAGGAGGAAGAGGAGGGCATCTCCCAGGAGTCCTCTGAGGAGGAGCA
GTGA

Library Parental gene expression (RPM)
SRP007412_brain 7 .80 RPM
SRP007412_cerebellum 7 .43 RPM
SRP007412_heart 11 .30 RPM
SRP007412_kidney 2 .89 RPM
SRP007412_liver 2 .84 RPM
SRP007412_testis 6 .63 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000001061 ortholog_one2many 1 retrogene
retro_amel_1637,
Callithrix jacchus ENSCJAG00000015226 ortholog_many2many 2 retrogenes
retro_cjac_1197, retro_cjac_3158,
Homo sapiens ENSG00000137309 ortholog_one2many 4 retrogenes
retro_hsap_1175, retro_hsap_2277, retro_hsap_4663, retro_hsap_695,
Myotis lucifugus ENSMLUG00000010085 ortholog_one2many 2 retrogenes
retro_mluc_1619, retro_mluc_2429,
Macaca mulatta ENSMMUG00000019529 ortholog_many2many 2 retrogenes
retro_mmul_1276, retro_mmul_2406,
Nomascus leucogenys ENSNLEG00000008303 ortholog_many2many 1 retrogene
retro_nleu_1097,
Procavia capensis ENSPCAG00000016076 ortholog_one2many 1 retrogene
retro_pcap_236,
Pongo abelii ENSPPYG00000029838 ortholog_many2many 4 retrogenes
retro_pabe_1941, retro_pabe_2441, retro_pabe_3623, retro_pabe_960,
Pan troglodytes ENSPTRG00000040884 ortholog_one2many 6 retrogenes
retro_ptro_1611, retro_ptro_2053, retro_ptro_3098, retro_ptro_499, retro_ptro_789, retro_ptro_807,
Pteropus vampyrus ENSPVAG00000014283 ortholog_one2many 1 retrogene
retro_pvam_116,
Rattus norvegicus ENSRNOG00000000488 ortholog_many2many 1 retrogene
retro_rnor_164,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_188 100.00 100.00
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Download FASTA sequences of all ENSMUSG00000046711 retrocopies